Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p14
         (744 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal...    31   4.4  
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal...    31   4.4  
AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by m...    31   4.4  
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m...    31   4.4  
AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by m...    31   4.4  
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m...    31   4.4  
BC033537-1|AAH33537.1|  419|Homo sapiens KIAA1576 protein protein.     30   7.6  
AB046796-1|BAB13402.1|  448|Homo sapiens KIAA1576 protein protein.     30   7.6  

>X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal
            antibody Ki-67 protein.
          Length = 2896

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -3

Query: 550  VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 371
            +A ++  F+  S    S T E+  KV S+   QPDL  T     P+  R +R   T++ +
Sbjct: 1350 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1408

Query: 370  SSFR 359
             +FR
Sbjct: 1409 LAFR 1412


>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
            antibody Ki-67 protein.
          Length = 3256

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -3

Query: 550  VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 371
            +A ++  F+  S    S T E+  KV S+   QPDL  T     P+  R +R   T++ +
Sbjct: 1710 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1768

Query: 370  SSFR 359
             +FR
Sbjct: 1769 LAFR 1772


>AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by
            monoclonal antibody Ki-67 protein.
          Length = 2896

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -3

Query: 550  VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 371
            +A ++  F+  S    S T E+  KV S+   QPDL  T     P+  R +R   T++ +
Sbjct: 1350 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1408

Query: 370  SSFR 359
             +FR
Sbjct: 1409 LAFR 1412


>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
            monoclonal antibody Ki-67 protein.
          Length = 3256

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -3

Query: 550  VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 371
            +A ++  F+  S    S T E+  KV S+   QPDL  T     P+  R +R   T++ +
Sbjct: 1710 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1768

Query: 370  SSFR 359
             +FR
Sbjct: 1769 LAFR 1772


>AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by
            monoclonal antibody Ki-67 protein.
          Length = 2896

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -3

Query: 550  VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 371
            +A ++  F+  S    S T E+  KV S+   QPDL  T     P+  R +R   T++ +
Sbjct: 1350 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1408

Query: 370  SSFR 359
             +FR
Sbjct: 1409 LAFR 1412


>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
            monoclonal antibody Ki-67 protein.
          Length = 3256

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -3

Query: 550  VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 371
            +A ++  F+  S    S T E+  KV S+   QPDL  T     P+  R +R   T++ +
Sbjct: 1710 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1768

Query: 370  SSFR 359
             +FR
Sbjct: 1769 LAFR 1772


>BC033537-1|AAH33537.1|  419|Homo sapiens KIAA1576 protein protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +1

Query: 310 FSKNIYEVEKLILLSRVEKNYIIAGFSLFLLV 405
           F+K+ ++VEK+  +   E+N +IAGFSL  L+
Sbjct: 291 FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL 322


>AB046796-1|BAB13402.1|  448|Homo sapiens KIAA1576 protein protein.
          Length = 448

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +1

Query: 310 FSKNIYEVEKLILLSRVEKNYIIAGFSLFLLV 405
           F+K+ ++VEK+  +   E+N +IAGFSL  L+
Sbjct: 320 FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL 351


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,201,156
Number of Sequences: 237096
Number of extensions: 1886040
Number of successful extensions: 6655
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6655
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)