Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p12
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   7.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 115  LNFKINTSAPIYNLLRLQSENYHHRLLTVLTQTILTY 5
            LNF I T A    + +LQ+   H + + ++  + +TY
Sbjct: 1332 LNFLIITQAMFLVVGQLQASQIHWQKIIIIVMSSVTY 1368


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 40  VCGGNFRFVIAISCKLELKYLF*NSINLGTC 132
           V  GN    +  SCKL  K +   +INL TC
Sbjct: 485 VVEGNPHCWVPHSCKLTSKEVPGETINLQTC 515


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 633 HHPKHQQLRAPYDS 592
           HH  H Q R P DS
Sbjct: 53  HHHHHLQARPPQDS 66


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 678 VEPFQAS*LTPWDPCHHPKHQ 616
           V+P       P D  HHP HQ
Sbjct: 28  VQPLPRHFNPPSDKLHHPIHQ 48


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -3

Query: 638 RVITQNTNNCVHLMI 594
           +++TQ++  C+HL +
Sbjct: 76  KILTQSSFECIHLSV 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,178
Number of Sequences: 336
Number of extensions: 2653
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)