Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2p12
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 303 6e-83
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 98 6e-21
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 54 1e-07
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 45 6e-05
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 45 6e-05
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 37 0.012
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.61
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.61
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.61
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.61
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 31 0.61
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.61
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 31 0.61
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.61
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 31 1.1
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 29 3.3
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 29 3.3
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 4.3
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 29 4.3
AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical ... 29 4.3
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 4.3
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 29 4.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 7.6
AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical ... 28 7.6
AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical ... 28 7.6
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 303 bits (745), Expect = 6e-83
Identities = 140/167 (83%), Positives = 157/167 (94%)
Frame = +3
Query: 210 YEPPIPTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQER 389
YE PIP+R+GKKK+ +KGPDAA KLP VTPH RCRLKLLK ERIKDYLLME+EFI+NQER
Sbjct: 28 YEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQER 87
Query: 390 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL 569
LKPQEE+ EEER+KVD+LRGTPM+VG+LEEIIDD HAIVST+VGSEHYV+I+SFVDK+QL
Sbjct: 88 LKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQL 147
Query: 570 EPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLD 710
EPGCSVLLNHK HAV+GVL DDTDPMVSVMKLEKAPQETYAD+GGLD
Sbjct: 148 EPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLD 194
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 103 bits (247), Expect = 1e-22
Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Frame = +3
Query: 225 PTRVGKK---KRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQ--ER 389
PT K K +G + A KLP V P +C ++LLK+ RI DYL +E+EFI Q
Sbjct: 15 PTHAAMKIAMKSGRRGIENANKLPTVAPKRQCLVRLLKMNRIHDYLQLEKEFITRQTSRH 74
Query: 390 LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD-NHAIVSTSVGS--EHYVSILSFVDK 560
+P + E+ V LRGTP ++ + E+ DD HA+V GS E YV ILS VDK
Sbjct: 75 GRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVE-GSRREWYVPILSIVDK 133
Query: 561 DQLEPGCSVLLN----HKV--HAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLD 710
D L V++ K A+VGVL D D K+EK P+ET+ DIGG +
Sbjct: 134 DLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCE 189
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 97.9 bits (233), Expect = 6e-21
Identities = 47/132 (35%), Positives = 83/132 (62%)
Frame = +3
Query: 315 LKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDN 494
+KL LER +L + E++I+ + R E+++ + +V ++ P+ +G E +D N
Sbjct: 38 IKLTTLERQLAHLQVMEDYIKLETR--NLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQN 95
Query: 495 HAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKA 674
HAIV ++ GS +YV +LS +D++ L+PGCSV L+ +A+V VL + D + +++ ++
Sbjct: 96 HAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEK 155
Query: 675 PQETYADIGGLD 710
P +Y DIGGLD
Sbjct: 156 PDISYGDIGGLD 167
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/162 (25%), Positives = 75/162 (46%)
Frame = +3
Query: 225 PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQE 404
P V RK DA + P+ + +++ + + + + + + Q+ L +
Sbjct: 3 PAPVFPNSRKPATLDANSDEQTLRPYFKTKVEQAE-QTVAEKSINVRRLMAQQKELNGKV 61
Query: 405 EKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCS 584
++EE S + + +G+ VG + + +D +V ++ V + + VD L G
Sbjct: 62 RLLKEEISHLHE-QGS--HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTR 118
Query: 585 VLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLD 710
V L +A+ VL DP+VS+M +EK P TY +GGLD
Sbjct: 119 VALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLD 160
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/162 (25%), Positives = 75/162 (46%)
Frame = +3
Query: 225 PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQE 404
P V RK DA + P+ + +++ + + + + + + Q+ L +
Sbjct: 24 PAPVFPNSRKPATLDANSDEQTLRPYFKTKVEQAE-QTVAEKSINVRRLMAQQKELNGKV 82
Query: 405 EKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCS 584
++EE S + + +G+ VG + + +D +V ++ V + + VD L G
Sbjct: 83 RLLKEEISHLHE-QGS--HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTR 139
Query: 585 VLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLD 710
V L +A+ VL DP+VS+M +EK P TY +GGLD
Sbjct: 140 VALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLD 181
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +3
Query: 375 RNQERLKPQEEKIEEE----RSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSI 542
+N RL+ Q ++ + + ++ L VG + + +D +V ++ V +
Sbjct: 50 QNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDV 109
Query: 543 LSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQETYADIGGLD 710
+D + L G V L +A+ +L + DP+VS+M +EK P TY +GGLD
Sbjct: 110 DKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLD 165
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 54.0 bits (124), Expect = 1e-07
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIID--DNH---------- 497
+M E R +E+I+E ++ + P V N+ E++D DN
Sbjct: 47 IMRSEVQRINHSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLD 106
Query: 498 ------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVM 659
A++ TS + +++ ++ VD D+L+PG V +N + ++ L + D V M
Sbjct: 107 AQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAM 166
Query: 660 KLEKAPQETYADIGGLD 710
++++ P E Y+DIGG D
Sbjct: 167 EVDERPTEQYSDIGGCD 183
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/127 (22%), Positives = 58/127 (45%)
Frame = +3
Query: 327 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIV 506
KL +D ++ + + + Q +K E + + L+ VG + + + + IV
Sbjct: 24 KLAECRDIEQKLKDLRKKESEMTKQFDKSEND---IKSLQSVGQIVGEVLKQLSEEKFIV 80
Query: 507 STSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQET 686
+ G + V ++K++L+ G V L+ ++ L + DP+V M E +
Sbjct: 81 KATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNIS 140
Query: 687 YADIGGL 707
Y+D+GGL
Sbjct: 141 YSDVGGL 147
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/127 (22%), Positives = 58/127 (45%)
Frame = +3
Query: 327 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIV 506
KL +D ++ + + + Q +K E + + L+ VG + + + + IV
Sbjct: 32 KLAECRDIEQKLKDLRKKESEMTKQFDKSEND---IKSLQSVGQIVGEVLKQLSEEKFIV 88
Query: 507 STSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSVMKLEKAPQET 686
+ G + V ++K++L+ G V L+ ++ L + DP+V M E +
Sbjct: 89 KATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNIS 148
Query: 687 YADIGGL 707
Y+D+GGL
Sbjct: 149 YSDVGGL 155
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 453 PMSVGNLEEII-DDNHA---IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 620
P+ V +II D H +++ ++ V + V +E G V ++ + +
Sbjct: 94 PLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHL 153
Query: 621 VLGDDTDPMVSVMKLEKAPQETYADIGG 704
L DP V++M++E+ P TY+D+GG
Sbjct: 154 PLPAKIDPTVTMMQVEEKPDVTYSDVGG 181
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDD 440
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDD 440
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDD 440
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDD 440
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 240 KKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE-RLKPQEEKIE 416
+++ K K +A + ++ P R R++ +K E ++ + E E ++ +E RLK +EEK++
Sbjct: 882 RREEKCKEKEAEEENEKLIPE-RKRMEAIKEE--EERVKAEREKVKKEEERLKAEEEKVK 938
Query: 417 EERSKV 434
E+ KV
Sbjct: 939 VEKEKV 944
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 231 RVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIR-NQERLKPQEE 407
RV ++ K K + LK + + E++K +E ++ +ERLK +EE
Sbjct: 915 RVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERLKAEEE 974
Query: 408 KIEEERSKV 434
K++ E+ KV
Sbjct: 975 KVKIEKEKV 983
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDD 440
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDD 440
L+EEE R +ERLK EK+EE VD+
Sbjct: 3 LLEEELERAEERLKIATEKLEEATHNVDE 31
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDD 440
L+EEE R +ERLK EK+EE VD+
Sbjct: 94 LLEEELERAEERLKIATEKLEEATHNVDE 122
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +3
Query: 237 GKKKRKAKGPDAALKLPQVTPH-TRCRLKLLKLERIKDYL-LMEEEFIRN--QERLKPQE 404
GKK++ A Q T T K+L +I++Y E E + N ++ +
Sbjct: 747 GKKEKAAPSTVPGASRSQSTKSSTEIPTKILGANKIREYEPANENEQLMNLKKQEVTGLP 806
Query: 405 EKIEEERSKVDDLRGTPMSVGNLEEI 482
EKI++ RS++DD+R + + N+ E+
Sbjct: 807 EKIDQLRSRLDDIR---VGIANMHEV 829
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 318 KLLKLERIKDY-LLMEEEFIRNQERLKPQEEKIEEERSK 431
KL +L + K + LLM E F RNQE L+ +E+K RSK
Sbjct: 89 KLKELMKKKSFILLMAERFDRNQE-LQRKEDKFARLRSK 126
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 351 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 491
+L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD
Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 351 LLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 491
+L+EE+ R ++RLK K+E+ D+ + ++ N ++ DD
Sbjct: 65 VLVEEDLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDD 111
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 279 KLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQ-EEKIEEERSKVDDLR 446
KL Q+ R++ L+ ++ + M E+ + E +K Q E+K+ E R ++DDL+
Sbjct: 1447 KLTQLRNELTARIEQLESQKSNEQAQMSEK-LSQVESMKVQIEQKLYETREELDDLK 1502
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 327 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 491
KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 327 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 491
KL+ K+ L E+ R Q+ K + ++ S +DD + LEE++D+
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSIDDKMNFDDEIEYLEEMLDN 261
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 458
L E+ R + R + +EEK+++E SK+ +L P+
Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398
>AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical
protein C17E7.5 protein.
Length = 366
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 264 PDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEF 371
PDA L+L Q++P R++ L + ++ + + +EEF
Sbjct: 240 PDAILRLKQISPQFLQRIRSLLVMKLIELKITDEEF 275
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 402 EEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ-LEPG 578
EE +E E +DD+ + GNLE D + S+ +E ++ +V++ + L G
Sbjct: 2739 EETVETEEMIMDDMMDLYYTPGNLEIARDTFDKLEIASIMNEILYTVDQYVEETEILFRG 2798
Query: 579 CSVLLNHKVHAVVGV 623
S + + AV+ +
Sbjct: 2799 ASTAADRQAFAVMSI 2813
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 354 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 458
L E+ R + R + +EEK+++E SK+ +L P+
Sbjct: 364 LFEKIEAREERRKRKEEEKLKDELSKIKELEEQPV 398
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 327 KLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 443
K E K+ + +EE + E K +EEK EEE K D++
Sbjct: 323 KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV 361
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Frame = +3
Query: 306 RCRLKLLKLERIKDYLLMEEEFI-----RNQERLKPQEEKIEEERSKV 434
R + + K+++ ++ L EEE + RN+E++K +EE+++ E KV
Sbjct: 890 RVKAEREKVKKEEERLKAEEEKVKVEKERNKEKVKAEEERLKAEEEKV 937
>AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical
protein T24E12.3 protein.
Length = 288
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 363 EEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDD 491
++F+ NQE+L +EKI+ ++ + D + S G+ E + D
Sbjct: 236 QKFLNNQEKLNEDQEKIKNDKER-DSISQVENSDGSSESGLAD 277
>AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical
protein Y54F10BM.3 protein.
Length = 745
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 243 KKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLL-MEEEFIRNQERL-KPQEEKIE 416
K R A G D A K P+ + +K + L+R LL ME+ ++N+E+ KPQ E E
Sbjct: 241 KNRNAGGVDPA-KRPRESAKWLKHVKEVTLKRGGVELLPMEDVIVKNKEKFKKPQNELRE 299
Query: 417 EE 422
E
Sbjct: 300 NE 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,363,489
Number of Sequences: 27780
Number of extensions: 269204
Number of successful extensions: 1071
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -