Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2p11
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105992-1|AAI05993.1| 275|Homo sapiens SYNGR2 protein protein. 34 0.63
BC029755-1|AAH29755.1| 224|Homo sapiens synaptogyrin 2 protein. 34 0.63
BC000407-1|AAH00407.1| 224|Homo sapiens synaptogyrin 2 protein. 34 0.63
AY358916-1|AAQ89275.1| 224|Homo sapiens synaptogyrin 2 protein. 34 0.63
AJ002310-1|CAA05327.1| 162|Homo sapiens synaptogyrin 2 protein. 34 0.63
AJ002308-1|CAA05325.1| 224|Homo sapiens synaptogyrin 2 protein. 34 0.63
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 3.4
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 3.4
AJ001057-1|CAA04507.1| 1299|Homo sapiens NrCAM protein protein. 30 7.8
>BC105992-1|AAI05993.1| 275|Homo sapiens SYNGR2 protein protein.
Length = 275
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 382 FFTSPGLITKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNE 242
F T P ++ ++V L+ +FSC+ + NA E C+FN NE
Sbjct: 20 FLTQPQVVARAVCLVFALIVFSCI-YGEGYSNAHESKQMYCVFNRNE 65
>BC029755-1|AAH29755.1| 224|Homo sapiens synaptogyrin 2 protein.
Length = 224
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 382 FFTSPGLITKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNE 242
F T P ++ ++V L+ +FSC+ + NA E C+FN NE
Sbjct: 20 FLTQPQVVARAVCLVFALIVFSCI-YGEGYSNAHESKQMYCVFNRNE 65
>BC000407-1|AAH00407.1| 224|Homo sapiens synaptogyrin 2 protein.
Length = 224
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 382 FFTSPGLITKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNE 242
F T P ++ ++V L+ +FSC+ + NA E C+FN NE
Sbjct: 20 FLTQPQVVARAVCLVFALIVFSCI-YGEGYSNAHESKQMYCVFNRNE 65
>AY358916-1|AAQ89275.1| 224|Homo sapiens synaptogyrin 2 protein.
Length = 224
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 382 FFTSPGLITKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNE 242
F T P ++ ++V L+ +FSC+ + NA E C+FN NE
Sbjct: 20 FLTQPQVVARAVCLVFALIVFSCI-YGEGYSNAHESKQMYCVFNRNE 65
>AJ002310-1|CAA05327.1| 162|Homo sapiens synaptogyrin 2 protein.
Length = 162
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 382 FFTSPGLITKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNE 242
F T P ++ ++V L+ +FSC+ + NA E C+FN NE
Sbjct: 20 FLTQPQVVARAVCLVFALIVFSCI-YGEGYSNAHESKQMYCVFNRNE 65
>AJ002308-1|CAA05325.1| 224|Homo sapiens synaptogyrin 2 protein.
Length = 224
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 382 FFTSPGLITKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNE 242
F T P ++ ++V L+ +FSC+ + NA E C+FN NE
Sbjct: 20 FLTQPQVVARAVCLVFALIVFSCI-YGEGYSNAHESKQMYCVFNRNE 65
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 409 MLYST*ICTFFTSPGLI-TKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNEWI 236
M+ +T + T +SP + T + + LF+ +T P ASE ++SR +NH WI
Sbjct: 11974 MVEATNLATTGSSPTVAKTTTTFNTLAGSLFTPLTTPGMSTLASESVTSRTSYNHRSWI 12032
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 409 MLYST*ICTFFTSPGLI-TKSVLLIINSYLFSCVTLPRQFLNASE*LSSRCMFNHNEWI 236
M+ +T + T +SP + T + + LF+ +T P ASE ++SR +NH WI
Sbjct: 3678 MVEATNLATTGSSPTVAKTTTTFNTLAGSLFTPLTTPGMSTLASESVTSRTSYNHRSWI 3736
>AJ001057-1|CAA04507.1| 1299|Homo sapiens NrCAM protein protein.
Length = 1299
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +3
Query: 147 SPCPSVF-EYDTSIQHPGRWYGVIKLSSDYTIHSLWLNIHLDDNYSEAFKNCLG-SVTQE 320
SP ++ EY+ ++ PG W+ ++S T L L+ +++ ++ N +G S+ E
Sbjct: 670 SPITTIHDEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSE 729
Query: 321 NKYEFMINRTDFVINPGEVKKVQIYVEYNITSSPPKMIGIAFNG 452
+++ ++ NP V+ + + N+ + + G FNG
Sbjct: 730 ASEQYLTKASEPDKNPTAVEGLGSEPD-NLVITWKPLNGFEFNG 772
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,265,947
Number of Sequences: 237096
Number of extensions: 2389530
Number of successful extensions: 4578
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4577
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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