Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p08
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA...    52   1e-05
UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C oxidoreductase-s...    47   4e-04
UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA...    44   0.005
UniRef50_Q4PM86 Cluster: Ubiquinol-cytochrome C reductase; n=1; ...    43   0.007
UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p...    42   0.012
UniRef50_A7GZE2 Cluster: Lipoprotein; n=3; Campylobacter|Rep: Li...    38   0.25 
UniRef50_O14957 Cluster: Ubiquinol-cytochrome c reductase comple...    37   0.59 
UniRef50_A5Z5H8 Cluster: Putative uncharacterized protein; n=1; ...    35   2.4  
UniRef50_A6G2Z5 Cluster: Putative uncharacterized protein; n=2; ...    34   3.1  
UniRef50_Q4UH31 Cluster: Integral membrane protein, putative; n=...    33   7.2  

>UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG14482-PA
           - Tribolium castaneum
          Length = 63

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 21/49 (42%), Positives = 33/49 (67%)
 Frame = +3

Query: 177 LSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEE 323
           + KK +E  S +  S ++FG T  +G+ + TDWK ++ Y+PYYN KF+E
Sbjct: 14  IGKKHIEIASQWIGSAVAFGATAGVGITYATDWKLILQYMPYYNGKFKE 62


>UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative; n=1;
           Aedes aegypti|Rep: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 54

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = +3

Query: 177 LSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEE 323
           L  KQ E+ + +  S + FG    +   +LTDW+ +VTYIP+Y  KF+E
Sbjct: 5   LGPKQAEQATKWISSAMGFGGAAALFGCYLTDWRVIVTYIPFYGGKFDE 53


>UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG14482-PA - Apis mellifera
          Length = 51

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = +3

Query: 171 MALSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEE 323
           M + K+  E  + +  SL+ +     + MVF+TDWK +  YIP+Y  KF++
Sbjct: 1   MKIGKRHFEIATKWIPSLMVYTGAAGLAMVFVTDWKVIAGYIPFYGNKFKD 51


>UniRef50_Q4PM86 Cluster: Ubiquinol-cytochrome C reductase; n=1;
           Ixodes scapularis|Rep: Ubiquinol-cytochrome C reductase
           - Ixodes scapularis (Black-legged tick) (Deer tick)
          Length = 54

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +3

Query: 168 VMALSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEE 323
           V  L  + +E    ++ S   +G   L+GM + T+WK V+ Y+P YNTK+++
Sbjct: 2   VSFLGPRVIELARVWSRSACFYGGAGLLGMTYFTEWKDVLQYLPIYNTKYKQ 53


>UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p -
           Drosophila melanogaster (Fruit fly)
          Length = 57

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 183 KKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEE 323
           KK  E  S F  S   FG    + +++ TDWK V+ Y+P Y +KFE+
Sbjct: 9   KKHAEIASSFIRSGAGFGGAAGLAVLYYTDWKLVLQYVPIYGSKFEK 55


>UniRef50_A7GZE2 Cluster: Lipoprotein; n=3; Campylobacter|Rep:
           Lipoprotein - Campylobacter curvus 525.92
          Length = 258

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = +3

Query: 177 LSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEEVKKKEC*IVFW 356
           ++  Q  K   F IS+  + +  L+ ++FLT  K        Y     +V +K C +VFW
Sbjct: 1   MASSQTSKWQNFKISISVYLIYALMRLIFLTCKKS-------YRDNGVKVPQKGCVVVFW 53

Query: 357 AGRLAALSYFLRR 395
            GRLA +SY  ++
Sbjct: 54  HGRLAFMSYAYKK 66


>UniRef50_O14957 Cluster: Ubiquinol-cytochrome c reductase complex
           6.4 kDa protein; n=11; Euteleostomi|Rep:
           Ubiquinol-cytochrome c reductase complex 6.4 kDa protein
           - Homo sapiens (Human)
          Length = 56

 Score = 36.7 bits (81), Expect = 0.59
 Identities = 13/49 (26%), Positives = 29/49 (59%)
 Frame = +3

Query: 177 LSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEE 323
           L  +  E +  +  +  ++G    +G+V+ TDW+ ++ ++PY N KF++
Sbjct: 6   LGPRYRELVKNWVPTAYTWGAVGAVGLVWATDWRLILDWVPYINGKFKK 54


>UniRef50_A5Z5H8 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 822

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 162 YSVMALSKKQLEKLSGFTISLLSF-GMTTLIGMVFLTDWKP 281
           YS+  LSKKQ  K    TI+ L+  G+  ++G  F++ W P
Sbjct: 424 YSLAVLSKKQNRKKHNLTIASLAIGGILFMVGATFISSWNP 464


>UniRef50_A6G2Z5 Cluster: Putative uncharacterized protein; n=2;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 220

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 224 VIVWNDNPDWNGVSY*LETCCYLH 295
           + +WNDNP WNG++Y  E   Y H
Sbjct: 139 IALWNDNPVWNGLNYMQEQGHYFH 162


>UniRef50_Q4UH31 Cluster: Integral membrane protein, putative; n=2;
           Eukaryota|Rep: Integral membrane protein, putative -
           Theileria annulata
          Length = 978

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = +3

Query: 42  FYVFVQFIFNSNFTIVRKTMLMVIQK-ILLYSC*LRVI*FVYSVMALSKKQLEKLSGFTI 218
           F++   FI    F    K    +++  I+L+ C  ++  FVYS M  SK  +   SGF  
Sbjct: 534 FFIVSHFIIGFQFQYGNKNSENILKLLIVLFIC--KIFLFVYSKMEPSKTVIFLFSGF-- 589

Query: 219 SLLSFGMTTLIGMVFLTDWKPVVTYI 296
            L+ +G T  + +  LT +   +TY+
Sbjct: 590 -LVIYGYTFFLFIHMLTYYNFQITYV 614


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,262,000
Number of Sequences: 1657284
Number of extensions: 14944525
Number of successful extensions: 35825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35809
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)