Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2p06
(710 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 58 1e-09
SPAC3F10.08c |||rRNA processing protein Faf1|Schizosaccharomyces... 31 0.12
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 31 0.21
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.28
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 30 0.38
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 29 0.66
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.87
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.0
SPAC25B8.18 |||mitochondrial electron carrier |Schizosaccharomyc... 27 2.6
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 27 2.6
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.6
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 3.5
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 27 3.5
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 27 3.5
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 27 3.5
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 27 3.5
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 4.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 4.6
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 26 6.1
SPCC338.06c |||heat shock protein Hsp20 family|Schizosaccharomyc... 26 6.1
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 25 8.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 8.1
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c... 25 8.1
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 25 8.1
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 58.0 bits (134), Expect = 1e-09
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +3
Query: 579 RKREREKTKGSQWFNLPAPEVTKDLKNDLQVLKMRSALDPKHFY 710
+K+ + T GS WF++PA E+T+ +K D+Q+LKMR+ALDPK Y
Sbjct: 103 KKKNIKDTAGSNWFDMPATELTESVKRDIQLLKMRNALDPKRHY 146
>SPAC3F10.08c |||rRNA processing protein Faf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 31.5 bits (68), Expect = 0.12
Identities = 38/144 (26%), Positives = 62/144 (43%)
Frame = +3
Query: 249 LQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKNKGNKLKFHFD 428
LQ K E DA E+ Q S ++ ED SDM + + + G+K+
Sbjct: 23 LQPVSAKPSETAFNSDASEKEQSPTTS----NEEEDAISDMEDKEDV--SFGSKI-LRVS 75
Query: 429 QLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKG 608
+ E L + +G V K+M P LE + + K + + +RKR R+ G
Sbjct: 76 HQEVEKPTLSATVGRVSFLKKM------PKLEDEEEIL---AKKREEQKLRKRSRQNDDG 126
Query: 609 SQWFNLPAPEVTKDLKNDLQVLKM 680
S + ++LKNDL++ K+
Sbjct: 127 SD------DDEVENLKNDLELQKL 144
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 219 IEKEETTKAILQLFDKKKQELDAQKDAE--EEIQKKLKSIKLDSQ 347
I+ + T + +L D + E+DA+ E +EI +KLK++K+D++
Sbjct: 102 IDFQLITSKVTKLIDSSEIEVDAEPKEENKKEIPEKLKNVKVDTE 146
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.28
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = +3
Query: 222 EKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQF--EDFFSDMNWTQSL-- 389
EK ET K L F K++L++Q E+ KKL++ + + ++ +N + S
Sbjct: 1258 EKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQEILLSLNSSTSTSS 1317
Query: 390 ----IKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKE 491
+KN+ + ++L+ E G LKS++ V + E
Sbjct: 1318 DASRLKNELVSKENLIEELNQEIGHLKSELETVKSKSE 1355
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 29.9 bits (64), Expect = 0.38
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 204 DKPYFIEKEETTKAILQLFDKKKQELD-AQKDAEEEIQKKLKSIKLDSQFEDF 359
D+P +IE+EE L D +++EL+ + ++ +EE KL SQ +DF
Sbjct: 64 DQPSYIEEEEDPDLEAYLSDLEREELEHSLEELDEENNYKLHLRYSFSQLQDF 116
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 0.66
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 231 ETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI-KLDSQFEDFFSD 368
E + ++ F ++K+EL++ D+E E K S+ K++ + E+F D
Sbjct: 59 ECEPSCVEYFRQRKEELESHVDSEIETSKDESSVNKVEEKVEEFKED 105
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.7 bits (61), Expect = 0.87
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 174 QLKD-ELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIK--LDS 344
++KD E E++ + K L DKK QEL+ ++ +E +K +S + L S
Sbjct: 456 KIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQS 515
Query: 345 QFEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLE 524
D ++ + +++ N+LK + + L S++ + EKE + E
Sbjct: 516 LQRDILNEKK-KHEVYESQLNELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNELSE 574
Query: 525 KQHSL 539
++SL
Sbjct: 575 SKNSL 579
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 171 LQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLD 341
LQL+ FE+ + E + +L+L + K + Q+D + ++K ++++K D
Sbjct: 642 LQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDV-DSLEKNIQTLKED 697
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 2.0
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +3
Query: 162 DDDLQLKDELFEKNDKPYFIEKEETTKAI-LQLFDKKKQELDAQKDAE-EEIQKKL-KSI 332
+D L L ++L + ++K + K+ + + ++ D+ K+E DA+KD ++ + L ++
Sbjct: 4081 EDHLDLPEDL-KLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENN 4139
Query: 333 KLDSQF-EDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETG 449
LD +D FSD+ + G + ++ TE G
Sbjct: 4140 TLDEDIQQDDFSDLAEDDEKMNEDGFEENVQENEESTEDG 4179
>SPAC25B8.18 |||mitochondrial electron carrier |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 121
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 234 TTKAILQLFDKKKQELDAQKDAE 302
TTK IL LF KK+Q L QK E
Sbjct: 5 TTKRILTLFTKKRQTLVEQKLTE 27
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 27.1 bits (57), Expect = 2.6
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 168 DLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQ 347
D++ K + N + + + +K I QL + + Q E+ ++K K+ + +
Sbjct: 2 DVKSKHGHIKSNPEESLLFRNSVSKNIAQLSSINYADRNVQAALEQLSERKFKNEREARK 61
Query: 348 FEDF--FSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTS 503
F FSD+ WT I + ++L + ++ ++K+ I E KT+
Sbjct: 62 QLPFEVFSDLIWTNGSIIKELSELSSQTLSVQSQLLKVKNSIDSYKNEWSKKTN 115
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 264 KKKQELDAQKDAEEEIQKKLKSIKLDSQF 350
K+K L+A D+E+E +KKLK +L + F
Sbjct: 2 KRKAVLEAFSDSEDEDEKKLKGPQLITGF 30
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3
Query: 174 QLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFE 353
+L +E ++ I EET + + ++ DA+K EE++ K+ D E
Sbjct: 824 ELNEEFATSSEVDNKISIEETKLKFMNVNSYVMEQYDARKKEIEELESKMSD--FDQSVE 881
Query: 354 DFFSDMN 374
+ +MN
Sbjct: 882 ELQDEMN 888
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 210 PYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQK---KLKSIKLDSQFED 356
PY E EE K + + + +Q++ +E++QK + ++ K+ SQF D
Sbjct: 81 PYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEKENPKVSSQFAD 132
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 267 KKQELDAQKDAEEEIQKKLKSIKLDSQF 350
KK E+ ++ + E + KLK+ +LDS F
Sbjct: 208 KKDEVSSESGSNEIVNAKLKNEQLDSNF 235
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 2 TLLSHFDKCGLCTFCKQIVDTLSLINHIYFQMSRTSAR 115
T LSHF C L K ++++L+NH Y +T R
Sbjct: 282 TRLSHFQPCELIYSNKLSSESVALLNH-YVSTEKTCGR 318
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 161 TSGVDYKIHYNIYYSSVHSYGTFENI 84
T GV Y +HYN Y + + T +NI
Sbjct: 47 TRGVVYYVHYNDYNKRLDEWITIDNI 72
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 DKKKQELDAQKDAEEEIQK-KLKSIKLDSQFED 356
+KK+QEL+ QK E++ QK + K +K Q D
Sbjct: 651 EKKQQELERQKREEKQKQKEREKKLKKQQQEAD 683
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 177 LKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQ 347
L++++ ++K F+ E+ ++I + K+ E+ D ++KKL SIK D Q
Sbjct: 907 LENQVTIADEKYEFLYAEK--QSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQ 961
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 279 VLVSFYQTVEVLPLWFLLFL*NKVYHFFQ 193
VL Y + V+ L FL F NK+YH F+
Sbjct: 732 VLQRRYASNPVVDLGFLTFEANKLYHLFE 760
>SPCC338.06c |||heat shock protein Hsp20 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 139
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 477 DVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKG 608
+ E ++ V PG++KQ+ H +K + RK+ E+ G
Sbjct: 40 ETEDTIEVDVEVPGIDKQNLKVDLHGSKLTISGERKKPEEEKAG 83
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 25.4 bits (53), Expect = 8.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Frame = +3
Query: 162 DDDLQLKDELFEKN-----DKPYF-----IEKEETTKAILQLFD-KKKQELDAQKDAEEE 308
D D+Q + FEKN D P F +EKE +++ KKQ + +K +EE
Sbjct: 255 DRDVQCIVQYFEKNYQYKGDVPNFEDISKMEKENNLDIMIEASGFNKKQSKELEKYRQEE 314
Query: 309 IQKKLKSIKLDSQFED 356
++K L +E+
Sbjct: 315 EKRKENGDDLSDNYEE 330
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 153 TAGDDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI 332
+A DD Q + FE+ D+P EE + + +L ++++++ K E IQ K+I
Sbjct: 580 SAALDDQQTTEAPFEEPDEPAHEPTEEEQEEMRKL----EEKIESTKYGLETIQTSGKTI 635
Query: 333 K 335
K
Sbjct: 636 K 636
>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 449
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 195 EKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAE 302
E N F++ + T+K ILQL ++K+ELD +++ +
Sbjct: 39 ESNTGNGFLDAK-TSKKILQLAREQKEELDEEENGK 73
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 177 LKDELFEKN--DKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI 332
L++ L + N DK +KE KA+ + + A KD E QK+L+S+
Sbjct: 547 LRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESV 600
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,587,022
Number of Sequences: 5004
Number of extensions: 51674
Number of successful extensions: 267
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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