Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p05
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.4  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   6.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 407 FALVSFYFLF-VNIHFTFGYFCEFDAVHPTKYVCNF-LFKNKQVHWFALIAESP 252
           F L  +YF   + I     YFC    + PT + C F L+  K   +  ++   P
Sbjct: 281 FLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRPFP 334


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 341 FDAVHPTKYVCNF 303
           + A+HP  YVC F
Sbjct: 17  YTAIHPLFYVCTF 29


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 341 FDAVHPTKYVCNF 303
           + A+HP  YVC F
Sbjct: 17  YTAIHPLFYVCTF 29


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +1

Query: 478 KSLRSPP--SMIVEWLDRLPGSDTE-LN*W 558
           KS + P    ++  WL+R PG + E  N W
Sbjct: 15  KSEKEPSLTDLVQRWLERTPGLELEGFNFW 44


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +1

Query: 478 KSLRSPP--SMIVEWLDRLPGSDTE-LN*W 558
           KS + P    ++  WL+R PG + E  N W
Sbjct: 175 KSEKEPSLTDLVQRWLERTPGLELEGFNFW 204


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +1

Query: 478 KSLRSPP--SMIVEWLDRLPGSDTE-LN*W 558
           KS + P    ++  WL+R PG + E  N W
Sbjct: 175 KSEKEPSLTDLVQRWLERTPGLELEGFNFW 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,655
Number of Sequences: 336
Number of extensions: 3617
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)