Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2p05
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0174 - 26149663-26149885,26150353-26151701 33 0.18
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 33 0.24
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 31 0.73
03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294 31 0.73
10_01_0154 - 1764554-1764727,1764829-1764927,1765710-1766172,176... 31 0.96
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 30 2.2
07_01_0113 + 840866-841574,841687-842210,842391-842840,843541-84... 29 3.9
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 29 3.9
02_03_0154 + 15797731-15798798 28 6.8
01_06_1717 + 39404449-39405062,39405157-39406321 28 6.8
12_02_0434 + 19025539-19026027,19026474-19027553 28 9.0
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 28 9.0
01_06_0746 - 31636024-31641396 28 9.0
>05_06_0174 - 26149663-26149885,26150353-26151701
Length = 523
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = -2
Query: 466 NLLNHTISSGVGSLRSYVGLSLSYPSISFS 377
N L TI S +G LRS VGL LSY S S S
Sbjct: 199 NSLTGTIPSRIGELRSLVGLDLSYNSFSGS 228
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 57 IEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSD 236
I+I + +EF + LR + L+ E Y + G+C AL + + N I+ LKV D
Sbjct: 90 IDIHSTQEFLDALRDAGDRLVIVEFYGTWCGSCRAL--FPRLCRTAVENPDILFLKVNFD 147
Query: 237 E 239
E
Sbjct: 148 E 148
>06_01_0090 -
724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -1
Query: 497 GGDLKLFFHR*FVKPYNFVGRGLTQVIRWSFALVSFYFLFVNIHFTFGYFCEF-DAVHPT 321
G FF + + Y ++GRGL + I V F+ + + FTF YF + V PT
Sbjct: 642 GSQFFQFFKWIYQERY-YIGRGLYESIGEYTRYVVFWLVILACKFTFAYFLQIRPLVDPT 700
Query: 320 KYVCNFLFKNKQVHWFALIA 261
+ +N W L++
Sbjct: 701 NVIVT--LRNLHYSWHDLVS 718
>03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294
Length = 171
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 441 DEIVWFNKLSMEKELEVAAQHDRRVARQAARKRHRAEL 554
D WF + E+E++ Q ++R A QAA K HR +L
Sbjct: 104 DADTWFERQQQEEEMQ-RLQAEQRAAMQAAEKLHREKL 140
>10_01_0154 -
1764554-1764727,1764829-1764927,1765710-1766172,
1766255-1766541
Length = 340
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 SNGKIILLKVPSDEVDSLRRFRDQSEPVYLFIFKQKVTNIFRGVDSIK--FAEVAKREVN 371
S GKI L +P D V + F + V + + ++ N++R V I +E +R+
Sbjct: 4 SPGKIRLSTLPDDIVFRIMSFLTMRQAVRMCVLSRRWRNLWRTVPCINADISEFKRRDTE 63
Query: 372 IYEKEIE 392
Y++E E
Sbjct: 64 HYDQETE 70
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 54 FIEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIK 188
F++ K EK ++ + T L+ + Y ++ G C + +L IIK
Sbjct: 17 FLDFKREKGHRDAIVTQRYLLVERDDYKKYNGICLMVQKLVNIIK 61
>07_01_0113 +
840866-841574,841687-842210,842391-842840,843541-843699
Length = 613
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 475 SIDNLLNHTISSGVGSLRSYVGLSLSYPSIS 383
S +NL+ +IS G+G L S V L LSY IS
Sbjct: 54 SSNNLIG-SISPGIGDLTSLVSLDLSYNDIS 83
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 29/41 (70%)
Frame = +3
Query: 330 DSIKFAEVAKREVNIYEKEIEGYESERPTYDLSEPTPDEIV 452
+S++ A+ +REV+I +++I+G +SER + +E DE+V
Sbjct: 304 NSVQVAD-GRREVDIRDRDIDGDDSERQKF--TEEEEDEVV 341
>02_03_0154 + 15797731-15798798
Length = 355
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 579 LFSLDVAPSVQLGVASGQPVEPLDDHAG 496
L LD PSV S QP+ P DD G
Sbjct: 214 LLDLDAEPSVPFANISNQPLPPPDDDGG 241
>01_06_1717 + 39404449-39405062,39405157-39406321
Length = 592
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 543 RAELMVPHLERINFVLFWPHCKHAHPELYEQWDLNGVC*RSRVLSASFVNEAVCLVQLKQ 722
RAE + E++ +L W + + +L WD + C +LSA V+E + L ++
Sbjct: 3 RAEYRLAVAEQV--ILGWHCARSSGADLAGVWDSDATCTNESLLSA--VDEVLLLAEIHA 58
Query: 723 RPLAA 737
P+A+
Sbjct: 59 FPMAS 63
>12_02_0434 + 19025539-19026027,19026474-19027553
Length = 522
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 465 LSMEKELEVAAQHDRRVARQAARKRHRAELMVPHL 569
+SM + V AQH+++ Q AR+ ++PHL
Sbjct: 25 ISMIVQAAVTAQHNKKECEQLARRAFMIAELLPHL 59
>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 93 LRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSDEVDSL-RRFRDQ 269
LR H + + ACTALD + + +D + K+ + D + L + F+D
Sbjct: 1192 LRAHGGLDVYLNLLEDDAWACTALDSIAVCLSHDNDHRKVEQALLKKDAIQKLVKFFQDC 1251
Query: 270 SEPVYLFI 293
E ++ I
Sbjct: 1252 PEQYFVHI 1259
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 446 FVGRGLTQVIRWSFALVSFYFLFVNIHFTFGYFCEF-DAVHPTKYVCNFLFKNKQVHWF 273
FVGRGL + + + F+ + F+F YF + V PTK + F + + +WF
Sbjct: 484 FVGRGLREGLIDNIKYSIFWVCLLVSKFSFSYFLQIKPMVGPTKVI--FKLHDIKRNWF 540
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,170,977
Number of Sequences: 37544
Number of extensions: 389145
Number of successful extensions: 1066
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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