Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p02
         (553 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7PQC1 Cluster: Chromosome chr18 scaffold_24, whole gen...    39   0.089
UniRef50_A5JZG8 Cluster: Putative uncharacterized protein; n=1; ...    36   0.47 
UniRef50_Q11MH5 Cluster: Polar amino acid ABC transporter, inner...    35   1.4  
UniRef50_Q17ME2 Cluster: Adenylate cyclase; n=1; Aedes aegypti|R...    33   3.3  
UniRef50_A4FHQ4 Cluster: Putative uncharacterized protein; n=3; ...    32   7.7  

>UniRef50_A7PQC1 Cluster: Chromosome chr18 scaffold_24, whole genome
           shotgun sequence; n=10; Magnoliophyta|Rep: Chromosome
           chr18 scaffold_24, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 455

 Score = 38.7 bits (86), Expect = 0.089
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
 Frame = +3

Query: 75  NYT-KDSIEMCKISTLALFICGPIIYKLLWFIRMGTLIHWSYIIGS-----AIYPKNTNG 236
           NYT  D++  C + T  ++ICG I Y LLW   +G +I  +  + S       + K  N 
Sbjct: 72  NYTYSDAVRAC-LGTRYVYICGIIQYILLWGTMVGYVITAATSMASIKRTNCFHQKEPNA 130

Query: 237 -CIA-LSGSCFAFVIIGSVLPTRMFPKLKLIATILSV 341
            C A +SG+ F  +  G  +    FP L+ I TILSV
Sbjct: 131 DCKAKVSGNLFMLIYGGVEILLSQFPSLEKI-TILSV 166


>UniRef50_A5JZG8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 890

 Score = 36.3 bits (80), Expect = 0.47
 Identities = 16/55 (29%), Positives = 31/55 (56%)
 Frame = +1

Query: 7   QSKCQLTNVQNA*LKKLNKNEMEIIQKTRSKCVKYQHWLSSSAVQ*YTNCYGSFV 171
           +++C      NA L+++ KN++ I++  + +  KY+HWL+         CYG F+
Sbjct: 61  ETRCSGDEEDNASLRRIFKNDLIILEGEKKEYTKYEHWLN--------ECYGKFL 107


>UniRef50_Q11MH5 Cluster: Polar amino acid ABC transporter, inner
           membrane subunit; n=2; Rhizobiales|Rep: Polar amino acid
           ABC transporter, inner membrane subunit - Mesorhizobium
           sp. (strain BNC1)
          Length = 362

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +3

Query: 153 LLWFI-RMG-TLIHWSYIIGSAIYPKNTNGCIALSGSCFAFVIIGS 284
           LLW + R G  L+ W+ ++ +AI+P     C+  +G+C++FVI  S
Sbjct: 40  LLWLMARFGWLLLDWA-VLKAAIFPAEPETCVGKTGACWSFVIAKS 84


>UniRef50_Q17ME2 Cluster: Adenylate cyclase; n=1; Aedes aegypti|Rep:
           Adenylate cyclase - Aedes aegypti (Yellowfever mosquito)
          Length = 492

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
 Frame = +3

Query: 117 LALFICGPIIYKLLWFI--RMGTLIHW--SYIIGSAIYPKNTNGC-IALSGSCFAFVIIG 281
           L L + G  +Y ++  +  RM T   W   YII +A  P    G  IA+  SCFA++   
Sbjct: 112 LILGLIGKFVYSVMIVVNTRMET---WPVEYIIYTATIPSVLTGADIAIFASCFAYISDV 168

Query: 282 SVLPTRMFPKLKLIATILS-VPPQIHMLVLLHRSVAARIENETLTKAIRAYSGLTLASTV 458
           + +  R F    L AT LS +P  + +  L++   A    + T+  AI A   L L S +
Sbjct: 169 TTVADRTFRITILDATYLSTMPIGVAIGSLIYNRTA---RSFTIMFAINA--SLLLLSII 223

Query: 459 WTVVSL 476
           ++++ L
Sbjct: 224 YSIIRL 229


>UniRef50_A4FHQ4 Cluster: Putative uncharacterized protein; n=3;
           Saccharopolyspora erythraea NRRL 2338|Rep: Putative
           uncharacterized protein - Saccharopolyspora erythraea
           (strain NRRL 23338)
          Length = 480

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 22/74 (29%), Positives = 39/74 (52%)
 Frame = +3

Query: 249 SGSCFAFVIIGSVLPTRMFPKLKLIATILSVPPQIHMLVLLHRSVAARIENETLTKAIRA 428
           +G  +  V+IG+V+ +  F +  ++ATI +    + M V  +  +   I    L K IR 
Sbjct: 391 AGLVWGLVLIGTVIVSVGFDQPLVLATIAACTGGVMMFV--YSGLLILINRRMLPKPIR- 447

Query: 429 YSGLTLASTVWTVV 470
            SG  LA+ VW+++
Sbjct: 448 ISGYRLAALVWSIL 461


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,271,865
Number of Sequences: 1657284
Number of extensions: 10456603
Number of successful extensions: 23823
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23818
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)