Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2p01
         (352 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8MP05 Cluster: Chitinase precursor; n=1; Tenebrio moli...    33   1.0  
UniRef50_A7LUU5 Cluster: Putative uncharacterized protein; n=1; ...    33   1.8  
UniRef50_Q18QJ3 Cluster: VWA containing CoxE-like; n=2; Desulfit...    32   3.1  
UniRef50_UPI00006C0451 Cluster: PREDICTED: hypothetical protein;...    31   5.4  
UniRef50_Q1GEP2 Cluster: DNA primase; n=7; Alphaproteobacteria|R...    31   7.2  
UniRef50_A0UD78 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_A0LL12 Cluster: Putative uncharacterized protein; n=1; ...    30   9.5  
UniRef50_Q5Z5F0 Cluster: Putative uncharacterized protein OSJNBa...    30   9.5  
UniRef50_Q0CH76 Cluster: Mediator of RNA polymerase II transcrip...    30   9.5  
UniRef50_Q9V4C8 Cluster: Host cell factor (dHcf) [Contains: HCF ...    30   9.5  

>UniRef50_Q8MP05 Cluster: Chitinase precursor; n=1; Tenebrio
            molitor|Rep: Chitinase precursor - Tenebrio molitor
            (Yellow mealworm)
          Length = 2838

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +1

Query: 241  TPPGSRLMSTFRESATVRRPLGATTRPGTTTRSWP 345
            T   +R  +T R + T RR    TTRP TTT SWP
Sbjct: 1099 TTTTTRRTTTTRRTTTTRRT--TTTRPSTTTTSWP 1131


>UniRef50_A7LUU5 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 290

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +1

Query: 241 TPPGSRLMSTFRESATVRRPLGATTRPGTTTRSWP 345
           T PG+   ST     T  RP G TTRPGT+TR  P
Sbjct: 65  TRPGTSRPSTSTRPDTSTRP-GTTTRPGTSTRPRP 98


>UniRef50_Q18QJ3 Cluster: VWA containing CoxE-like; n=2;
           Desulfitobacterium hafniense|Rep: VWA containing
           CoxE-like - Desulfitobacterium hafniense (strain DCB-2)
          Length = 453

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 344 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVP 237
           G  L V PGR    +G+ T+ALS  V  +L+ GG+P
Sbjct: 236 GRRLAVRPGRRHQVAGKGTIALSRTVRRALQTGGIP 271


>UniRef50_UPI00006C0451 Cluster: PREDICTED: hypothetical protein;
           n=3; Catarrhini|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 314

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 312 GCAER-PSHGRAFSESRHKS*AWRCTEEHQSRC 217
           GC+ R P  GR+ SE   +  +WRC    + RC
Sbjct: 42  GCSGRWPPGGRSVSEREDRGASWRCQARRRGRC 74


>UniRef50_Q1GEP2 Cluster: DNA primase; n=7; Alphaproteobacteria|Rep:
           DNA primase - Silicibacter sp. (strain TM1040)
          Length = 669

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 238 GTPPGSRLMSTFRESATVRRPLGATTRPGTTTRS 339
           G  PGSR+   FR+ A  R P GA   P +TTR+
Sbjct: 446 GFKPGSRMQGGFRDGA--RMPWGAPPPPRSTTRA 477


>UniRef50_A0UD78 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia multivorans ATCC 17616|Rep: Putative
           uncharacterized protein - Burkholderia multivorans ATCC
           17616
          Length = 363

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 235 LGTPPGSRLMSTFRESATVRRPLGATTRPGTTTRSWP 345
           L  PPG+     F    + RRP GA+  P   TR WP
Sbjct: 86  LPAPPGAA-GEPFTPGTSARRPRGASVGPHGPTRQWP 121


>UniRef50_A0LL12 Cluster: Putative uncharacterized protein; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Putative
           uncharacterized protein - Syntrophobacter fumaroxidans
           (strain DSM 10017 / MPOB)
          Length = 142

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 241 TPPGSRLMSTFRESATVRRPLGATTRPGTTTRSWP 345
           +PPG R+M + RES T   P  A T P T ++  P
Sbjct: 94  SPPGERIMGSPRESVTFESPRVALTCPITLSKFNP 128


>UniRef50_Q5Z5F0 Cluster: Putative uncharacterized protein
           OSJNBa0001B21.25; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0001B21.25 - Oryza sativa subsp. japonica (Rice)
          Length = 107

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 253 SRLMSTFRESATVRRPLGATTRPGTTTRSWPP 348
           SR  + F E    R  L ATTRP T +R  PP
Sbjct: 63  SRTATAFGEYKIYRVQLAATTRPATASRQAPP 94


>UniRef50_Q0CH76 Cluster: Mediator of RNA polymerase II
           transcription subunit 6; n=14; Trichocomaceae|Rep:
           Mediator of RNA polymerase II transcription subunit 6 -
           Aspergillus terreus (strain NIH 2624)
          Length = 324

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 247 PGSRLMSTFRESATVRRPLGATTRPGT 327
           PGS +MS   E A  ++P   TTRPGT
Sbjct: 257 PGSFIMSRNNEGAASKQPPVGTTRPGT 283


>UniRef50_Q9V4C8 Cluster: Host cell factor (dHcf) [Contains: HCF
            N-terminal chain; HCF C- terminal chain]; n=4;
            Sophophora|Rep: Host cell factor (dHcf) [Contains: HCF
            N-terminal chain; HCF C- terminal chain] - Drosophila
            melanogaster (Fruit fly)
          Length = 1500

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 344  GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 219
            G+ ++V+PG     S   T ALS +       GG PR+++LA
Sbjct: 932  GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 973


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,496,264
Number of Sequences: 1657284
Number of extensions: 2765051
Number of successful extensions: 9921
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9910
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)