Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2o22
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.0  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   7.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.3  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 626 LVYILCKEGH 655
           L+YI+C EGH
Sbjct: 325 LLYIICNEGH 334


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 626 LVYILCKEGH 655
           L+YI+C EGH
Sbjct: 325 LLYIICNEGH 334


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 338 LPQFIKWTTETESNNGKKKICTASLTLVSSSKYFEKYNEL 457
           +P FI    E+ S  G KK+     TL  + +Y     +L
Sbjct: 79  IPNFIAAAFESNSRGGNKKLSKVE-TLRMAVEYIRSLEDL 117


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 645 LHNIYTNKPLPHPRSTNV 592
           +H+   N PLP PR   V
Sbjct: 104 MHDQQNNNPLPSPRRVAV 121


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 299 HHHSVHSRQSYHSQH 255
           +HH  H  Q  H QH
Sbjct: 164 NHHMGHHMQEQHPQH 178


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 299 HHHSVHSRQSYHSQH 255
           +HH  H  Q  H QH
Sbjct: 166 NHHMGHHMQEQHPQH 180


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 550 FAPALGRPKFSKETNIC 600
           F P L  PKF K+  +C
Sbjct: 211 FQPLLRLPKFKKKPLLC 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,286
Number of Sequences: 336
Number of extensions: 3656
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)