Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o22
(679 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.10 |||methyltransferase, DUF1613 family |Schizosaccharom... 94 1e-20
SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces pombe... 29 0.47
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 29 0.47
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 29 0.62
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 28 1.4
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 2.5
SPBC354.11c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.5
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 3.3
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 27 3.3
SPCC1223.12c |meu10||GPI anchored cell surface protein |Schizosa... 26 5.8
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 26 5.8
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 25 7.6
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 25 7.6
>SPCC663.10 |||methyltransferase, DUF1613 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 502
Score = 94.3 bits (224), Expect = 1e-20
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +2
Query: 413 TLVSSSKYFEKYNELKLKYGKDLVKIWPECTDPTKFVYEDVAIATYLLLLWEDR-SLVKK 589
T+V +K+ + Y LK KY K LV W E TDP K V+ED+AIA +L+ LW+ S K+
Sbjct: 217 TVVERNKFQDTYVILKDKYAKQLVDNWVEKTDPGKHVFEDLAIAAFLIELWKQTYSSNKE 276
Query: 590 QTFVDLGCGNGLLVYILCKEGHAGLGIDVR 679
+FVD+GCGNGLLVY+L EG+ G G D R
Sbjct: 277 FSFVDVGCGNGLLVYLLLMEGYNGYGFDAR 306
>SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 29.5 bits (63), Expect = 0.47
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 419 VSSSKYFEKYNELKLKYGKDLVKIWPECTDPTKFVYEDVAIATYLLLLW 565
VS +YF Y++L L + K K W + + T Y + AT++ +W
Sbjct: 232 VSDPEYFPVYHKLLLFWQKPARKCWWDSS--TSITYNGIEFATWVRRVW 278
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 29.5 bits (63), Expect = 0.47
Identities = 25/95 (26%), Positives = 41/95 (43%)
Frame = +2
Query: 149 YQLIIINKLESYIIFYNVTPSEVIQNTTPSFTYGIHVENDMIVLNAHCDDENSKSYMWLK 328
Y L+I + LE + P + T P Y I ++L H N ++Y+ +
Sbjct: 41 YDLVITHALEWPSLTIQWLPDK---KTIPGTDYSIQ----RLILGTHTSG-NDQNYLQIA 92
Query: 329 NKLLPQFIKWTTETESNNGKKKICTASLTLVSSSK 433
+ LP F + TTE + ++ T S T+ S K
Sbjct: 93 SVQLPNFDEDTTEFTPSTIRRAQATGSYTIEISQK 127
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 29.1 bits (62), Expect = 0.62
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 599 VDLGCGNGLLVYILCKEGHAGLGIDV 676
+D+GCG+G+ I +GH +G+D+
Sbjct: 52 LDIGCGSGISTQIGESQGHVVVGMDI 77
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAGL-GIDV 676
+DV +Y + ++ L + + +D+GCG G+L + G + G+D+
Sbjct: 35 DDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARAGAKHVYGVDM 85
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEG 652
+ V Y ++ ++ + +T +D+GCG G+L K G
Sbjct: 236 DSVRTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAG 277
>SPBC354.11c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 393 FFFPLLLSVSVVHLINCGKSLFLSHMYDFEFSSSQCAF 280
FF LL +S HLI K +F + DF+ +S C+F
Sbjct: 59 FFESFLLPLSFAHLIKQRKLIF-NKAIDFKLNSLCCSF 95
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 32 LYKFGGNSNMAKSHS*IRKYCFEINILE 115
LY F GN+N ++ + ++ Y E+ +LE
Sbjct: 435 LYNFNGNANPSRLNPALKNYMEELKLLE 462
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 575 SLVKKQTFVDLGCGNGLLVYILCKEGHAGLGID 673
+L +DLGCG+G+L L + +GID
Sbjct: 30 NLSSSDELLDLGCGDGVLTNELVSQCRRVVGID 62
>SPCC1223.12c |meu10||GPI anchored cell surface protein
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 416
Score = 25.8 bits (54), Expect = 5.8
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Frame = +2
Query: 182 YIIFYNVTP-SEVIQNTTPSFT----YGIHVENDMIVLNAHCDDENSKSYMWLKNKLLPQ 346
+ +F + T S VI TP+ Y I +ND+ VL+ +C N M +
Sbjct: 7 FYLFTSFTAWSVVIAGATPAVCGAPEYIIETQNDLDVLS-NCQVVNGSIIMNTSSATSLN 65
Query: 347 FIKWTTET-----ESNNGKKKICTASLTLVSSSKYFEKYNELKLKYGKDLVKI 490
F + T T +NN + S++ V FEK L Y L +
Sbjct: 66 FNRIETITGDLIIRNNNYLASVALTSISSVGGELRFEKLTRLASVYAPQLANV 118
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/42 (21%), Positives = 23/42 (54%)
Frame = +2
Query: 548 YLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAGLGID 673
++ ++ +R+ + +D+GCG G+L + + G + +D
Sbjct: 65 FMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASVTAVD 106
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +2
Query: 251 IHVENDMIVLNAHCDDENSKSYMWLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSS 430
IH+ + + +L HCD E S S ++ + S++ +I S
Sbjct: 287 IHLVDILEILTVHCDLEESFSIVFSTQPRFIARYNELVQAVSSSSNSEIDEVEDAETIDS 346
Query: 431 KYFEKYNEL 457
K EK N+L
Sbjct: 347 KILEKRNDL 355
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 405 AVQIFFFPLLLSVSVVHLINCGKSL-FLSHMYDFEFSSSQCAFKTI 271
A+ FPLLL H++N SL + S M +SSS+ A ++
Sbjct: 143 AITSALFPLLLQDPNPHVVNIASSLAYFSAMGVGAYSSSKAALVSL 188
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,849,631
Number of Sequences: 5004
Number of extensions: 58778
Number of successful extensions: 185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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