Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o22
(679 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071306-1|AAL48928.1| 469|Drosophila melanogaster RE33302p pro... 102 4e-22
AE014297-965|AAF54397.1| 469|Drosophila melanogaster CG9386-PA ... 102 4e-22
BT003167-1|AAO24922.1| 474|Drosophila melanogaster SD23052p pro... 36 0.051
AY051841-1|AAK93265.1| 516|Drosophila melanogaster LD34544p pro... 36 0.051
AE014297-1963|AAN13635.1| 474|Drosophila melanogaster CG6563-PB... 36 0.051
AE014297-1962|AAF55147.1| 516|Drosophila melanogaster CG6563-PA... 36 0.051
AY095041-1|AAM11369.1| 376|Drosophila melanogaster LD28808p pro... 34 0.21
AM294295-1|CAL26213.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294294-1|CAL26212.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294293-1|CAL26211.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294292-1|CAL26210.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294291-1|CAL26209.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294290-1|CAL26208.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294289-1|CAL26207.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294288-1|CAL26206.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294287-1|CAL26191.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294286-1|CAL26190.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AM294285-1|CAL26189.1| 376|Drosophila melanogaster CG6554 protein. 34 0.21
AE014297-1201|AAF54556.1| 376|Drosophila melanogaster CG6554-PA... 34 0.21
AY089308-1|AAL90046.1| 219|Drosophila melanogaster AT11165p pro... 31 1.9
AE014134-527|AAF51171.1| 219|Drosophila melanogaster CG9643-PA ... 31 1.9
AY071354-1|AAL48976.1| 200|Drosophila melanogaster RE38979p pro... 30 3.3
AE014134-541|AAF51158.2| 307|Drosophila melanogaster CG17219-PA... 30 3.3
AY071172-1|AAL48794.1| 276|Drosophila melanogaster RE22146p pro... 29 4.4
AE014297-691|AAF54183.1| 276|Drosophila melanogaster CG10903-PA... 29 4.4
AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p pro... 29 5.8
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 29 5.8
U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein. 29 7.7
DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge spli... 29 7.7
AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge prot... 29 7.7
AE014298-1976|AAF48332.1| 802|Drosophila melanogaster CG11071-P... 29 7.7
AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA... 29 7.7
AE014296-696|AAN11571.1| 206|Drosophila melanogaster CG32263-PA... 29 7.7
>AY071306-1|AAL48928.1| 469|Drosophila melanogaster RE33302p
protein.
Length = 469
Score = 102 bits (245), Expect = 4e-22
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Frame = +2
Query: 320 WLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSKYFEKYNELKLKYGKDLVKIWP- 496
WL+ L P+ + W+ +++ + K K SL LV+ KY + Y ELK ++ + L++ W
Sbjct: 74 WLEFVLRPKLLSWS-QSKQDEAKVK----SLGLVNVEKYNDLYKELKQRHSQRLLEHWKT 128
Query: 497 --ECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAGLGI 670
E TDP KF+YED+AIA YL++LW ++ + F DLGCGNGLLV++L EG+ G G
Sbjct: 129 AQESTDPLKFIYEDLAIAAYLIVLWS-QTQSEPTAFADLGCGNGLLVHVLNAEGYKGYGY 187
Query: 671 DVR 679
D+R
Sbjct: 188 DIR 190
>AE014297-965|AAF54397.1| 469|Drosophila melanogaster CG9386-PA
protein.
Length = 469
Score = 102 bits (245), Expect = 4e-22
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Frame = +2
Query: 320 WLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSKYFEKYNELKLKYGKDLVKIWP- 496
WL+ L P+ + W+ +++ + K K SL LV+ KY + Y ELK ++ + L++ W
Sbjct: 74 WLEFVLRPKLLSWS-QSKQDEAKVK----SLGLVNVEKYNDLYKELKQRHSQRLLEHWKT 128
Query: 497 --ECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAGLGI 670
E TDP KF+YED+AIA YL++LW ++ + F DLGCGNGLLV++L EG+ G G
Sbjct: 129 AQESTDPLKFIYEDLAIAAYLIVLWS-QTQSEPTAFADLGCGNGLLVHVLNAEGYKGYGY 187
Query: 671 DVR 679
D+R
Sbjct: 188 DIR 190
>BT003167-1|AAO24922.1| 474|Drosophila melanogaster SD23052p
protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.051
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAG-LGID 673
+ V +TY L ++ ++V+ +T +D+GCG G+L K G A +GID
Sbjct: 182 DKVRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAGAARVVGID 231
>AY051841-1|AAK93265.1| 516|Drosophila melanogaster LD34544p
protein.
Length = 516
Score = 35.9 bits (79), Expect = 0.051
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAG-LGID 673
+ V +TY L ++ ++V+ +T +D+GCG G+L K G A +GID
Sbjct: 224 DKVRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAGAARVVGID 273
>AE014297-1963|AAN13635.1| 474|Drosophila melanogaster CG6563-PB,
isoform B protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.051
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAG-LGID 673
+ V +TY L ++ ++V+ +T +D+GCG G+L K G A +GID
Sbjct: 182 DKVRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAGAARVVGID 231
>AE014297-1962|AAF55147.1| 516|Drosophila melanogaster CG6563-PA,
isoform A protein.
Length = 516
Score = 35.9 bits (79), Expect = 0.051
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAG-LGID 673
+ V +TY L ++ ++V+ +T +D+GCG G+L K G A +GID
Sbjct: 224 DKVRTSTYRASLLQNEAVVRGKTVLDVGCGTGILSIFASKAGAARVVGID 273
>AY095041-1|AAM11369.1| 376|Drosophila melanogaster LD28808p
protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294295-1|CAL26213.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294294-1|CAL26212.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294293-1|CAL26211.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294292-1|CAL26210.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294291-1|CAL26209.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294290-1|CAL26208.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294289-1|CAL26207.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294288-1|CAL26206.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294287-1|CAL26191.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294286-1|CAL26190.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AM294285-1|CAL26189.1| 376|Drosophila melanogaster CG6554 protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AE014297-1201|AAF54556.1| 376|Drosophila melanogaster CG6554-PA
protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHA 658
++V TY ++ ++ L + +T +D+GCG G+L K G A
Sbjct: 72 DEVRTVTYRNAMYHNKHLFQGKTVLDVGCGTGILSMFAAKAGAA 115
>AY089308-1|AAL90046.1| 219|Drosophila melanogaster AT11165p
protein.
Length = 219
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 557 LLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAG--LGID 673
LL E++ + +DLGCGNG+ + L EG G G+D
Sbjct: 50 LLNEEKIDKEASRVLDLGCGNGMFLVGLANEGFTGDLTGVD 90
>AE014134-527|AAF51171.1| 219|Drosophila melanogaster CG9643-PA
protein.
Length = 219
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 557 LLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAG--LGID 673
LL E++ + +DLGCGNG+ + L EG G G+D
Sbjct: 50 LLNEEKIDKEASRVLDLGCGNGMFLVGLANEGFTGDLTGVD 90
>AY071354-1|AAL48976.1| 200|Drosophila melanogaster RE38979p
protein.
Length = 200
Score = 29.9 bits (64), Expect = 3.3
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = +2
Query: 485 KIWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEG 652
KIW ECT ED+ + YL +ED S K++ +DLGCG GLL K G
Sbjct: 119 KIW-ECT-------EDLLL--YLSEKYED-SFWKEKRVLDLGCGCGLLGIYAMKHG 163
>AE014134-541|AAF51158.2| 307|Drosophila melanogaster CG17219-PA
protein.
Length = 307
Score = 29.9 bits (64), Expect = 3.3
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = +2
Query: 485 KIWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEG 652
KIW ECT ED+ + YL +ED S K++ +DLGCG GLL K G
Sbjct: 119 KIW-ECT-------EDLLL--YLSEKYED-SFWKEKRVLDLGCGCGLLGIYAMKHG 163
>AY071172-1|AAL48794.1| 276|Drosophila melanogaster RE22146p
protein.
Length = 276
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 467 YGKDLVKIWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCK 646
Y D K + T + E A LL L +D + + +D+GCG+GL +L
Sbjct: 15 YNDDEAKKYSTNTRIIEIQVEMAERALELLALPDDD---ESRLILDIGCGSGLSGSVLED 71
Query: 647 EGHAGLGIDV 676
H +GID+
Sbjct: 72 SEHMWIGIDI 81
>AE014297-691|AAF54183.1| 276|Drosophila melanogaster CG10903-PA
protein.
Length = 276
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 467 YGKDLVKIWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCK 646
Y D K + T + E A LL L +D + + +D+GCG+GL +L
Sbjct: 15 YNDDEAKKYSTNTRIIEIQVEMAERALELLALPDDD---ESRLILDIGCGSGLSGSVLED 71
Query: 647 EGHAGLGIDV 676
H +GID+
Sbjct: 72 SEHMWIGIDI 81
>AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p
protein.
Length = 1272
Score = 29.1 bits (62), Expect = 5.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 HHHSVHSRQSYHSQHEYH 246
HHH H +Q H QH +H
Sbjct: 750 HHHHHHQQQPQHHQHHHH 767
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 29.1 bits (62), Expect = 5.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 299 HHHSVHSRQSYHSQHEYH 246
HHH H +Q H QH +H
Sbjct: 3017 HHHHHHQQQPQHHQHHHH 3034
>U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein.
Length = 829
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -3
Query: 305 SFHHHSVHSRQS-YHSQHEYH 246
S HHH +H S YH H YH
Sbjct: 106 SHHHHHLHHHYSPYHHAHPYH 126
>DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge splice
variant protein.
Length = 705
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -3
Query: 305 SFHHHSVHSRQS-YHSQHEYH 246
S HHH +H S YH H YH
Sbjct: 106 SHHHHHLHHHYSPYHHAHPYH 126
>AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge
protein.
Length = 826
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -3
Query: 305 SFHHHSVHSRQS-YHSQHEYH 246
S HHH +H S YH H YH
Sbjct: 106 SHHHHHLHHHYSPYHHAHPYH 126
>AE014298-1976|AAF48332.1| 802|Drosophila melanogaster CG11071-PA
protein.
Length = 802
Score = 28.7 bits (61), Expect = 7.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 299 HHHSVHSRQSYHSQHEYH 246
HHH H +Q + +QH++H
Sbjct: 575 HHHHHHQQQHHQAQHQHH 592
>AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA
protein.
Length = 826
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -3
Query: 305 SFHHHSVHSRQS-YHSQHEYH 246
S HHH +H S YH H YH
Sbjct: 106 SHHHHHLHHHYSPYHHAHPYH 126
>AE014296-696|AAN11571.1| 206|Drosophila melanogaster CG32263-PA
protein.
Length = 206
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 610 SKIHKCLFLY*TSVFPKQEQISCNSNI---FIYKFCRISTFWPNL 485
S I+ LF Y +S+ + + CNS + F+Y + FWP L
Sbjct: 122 SPIYIFLFFYVSSLLGGKSFVECNSELSEKFLYTWMLDCCFWPGL 166
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,209,503
Number of Sequences: 53049
Number of extensions: 580785
Number of successful extensions: 2180
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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