Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o22
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-5|AAZ32802.1| 408|Caenorhabditis elegans Hypothetical pr... 91 9e-19
U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical pr... 91 9e-19
U39851-3|AAZ32804.1| 563|Caenorhabditis elegans Hypothetical pr... 91 9e-19
Z47357-4|CAA87423.1| 345|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 31 0.76
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical... 30 1.3
Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z66513-10|CAH19084.1| 488|Caenorhabditis elegans Hypothetical p... 30 1.7
Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical pr... 30 1.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 1.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.7
U39849-1|AAA81045.2| 332|Caenorhabditis elegans Serpentine rece... 29 2.3
AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical... 29 2.3
U58757-6|AAC47920.1| 656|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 4.0
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 28 5.3
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 28 5.3
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 28 5.3
Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical p... 28 7.0
AC006641-12|AAF39810.1| 501|Caenorhabditis elegans Hypothetical... 28 7.0
AC006641-10|AAF39811.1| 501|Caenorhabditis elegans Hypothetical... 28 7.0
AC006641-8|AAF39822.1| 508|Caenorhabditis elegans Hypothetical ... 28 7.0
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr... 27 9.3
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 27 9.3
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 27 9.3
>U39851-5|AAZ32802.1| 408|Caenorhabditis elegans Hypothetical
protein C23G10.7a protein.
Length = 408
Score = 90.6 bits (215), Expect = 9e-19
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Frame = +2
Query: 92 CFEINILELFPKNYAD-KASYQLIIINKLESYII--FYNVTPSEVIQNTTPS-FTYGIHV 259
C EI I ++ K+ A+ K S ++ E ++ FY +T + S ++ I +
Sbjct: 76 CSEIAITKIIHKDLANNKFSDNAFEVSYYEEELLVRFYPITLDGMQHPHFESPYSIAIKI 135
Query: 260 ENDMIVLNAHCDDENSKS--YMWLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSK 433
D + NS + ++K + Q W + + +K + +L+
Sbjct: 136 PTDTSIQLQFLKQANSSQEHFEFMKKQAFKQLYTWLKGIDLSKSSRK----TNSLLDKES 191
Query: 434 YFEKYNELKLKYGKDLVKIWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGC 613
Y + Y ++ YG+ ++K W E ++P K ++ED IA+Y+ L L K FVD+GC
Sbjct: 192 YIKTYRHIREDYGRGMIKGWTENSNPQKSIFEDCGIASYINELVNSDLLPKPNKFVDIGC 251
Query: 614 GNGLLVYILCKEGHAGLGIDVR 679
GNGLLV++L K G +G GIDVR
Sbjct: 252 GNGLLVHLLNKIGMSGYGIDVR 273
>U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical
protein C23G10.7b protein.
Length = 572
Score = 90.6 bits (215), Expect = 9e-19
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Frame = +2
Query: 92 CFEINILELFPKNYAD-KASYQLIIINKLESYII--FYNVTPSEVIQNTTPS-FTYGIHV 259
C EI I ++ K+ A+ K S ++ E ++ FY +T + S ++ I +
Sbjct: 76 CSEIAITKIIHKDLANNKFSDNAFEVSYYEEELLVRFYPITLDGMQHPHFESPYSIAIKI 135
Query: 260 ENDMIVLNAHCDDENSKS--YMWLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSK 433
D + NS + ++K + Q W + + +K + +L+
Sbjct: 136 PTDTSIQLQFLKQANSSQEHFEFMKKQAFKQLYTWLKGIDLSKSSRK----TNSLLDKES 191
Query: 434 YFEKYNELKLKYGKDLVKIWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGC 613
Y + Y ++ YG+ ++K W E ++P K ++ED IA+Y+ L L K FVD+GC
Sbjct: 192 YIKTYRHIREDYGRGMIKGWTENSNPQKSIFEDCGIASYINELVNSDLLPKPNKFVDIGC 251
Query: 614 GNGLLVYILCKEGHAGLGIDVR 679
GNGLLV++L K G +G GIDVR
Sbjct: 252 GNGLLVHLLNKIGMSGYGIDVR 273
>U39851-3|AAZ32804.1| 563|Caenorhabditis elegans Hypothetical
protein C23G10.7c protein.
Length = 563
Score = 90.6 bits (215), Expect = 9e-19
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Frame = +2
Query: 92 CFEINILELFPKNYAD-KASYQLIIINKLESYII--FYNVTPSEVIQNTTPS-FTYGIHV 259
C EI I ++ K+ A+ K S ++ E ++ FY +T + S ++ I +
Sbjct: 76 CSEIAITKIIHKDLANNKFSDNAFEVSYYEEELLVRFYPITLDGMQHPHFESPYSIAIKI 135
Query: 260 ENDMIVLNAHCDDENSKS--YMWLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSK 433
D + NS + ++K + Q W + + +K + +L+
Sbjct: 136 PTDTSIQLQFLKQANSSQEHFEFMKKQAFKQLYTWLKGIDLSKSSRK----TNSLLDKES 191
Query: 434 YFEKYNELKLKYGKDLVKIWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGC 613
Y + Y ++ YG+ ++K W E ++P K ++ED IA+Y+ L L K FVD+GC
Sbjct: 192 YIKTYRHIREDYGRGMIKGWTENSNPQKSIFEDCGIASYINELVNSDLLPKPNKFVDIGC 251
Query: 614 GNGLLVYILCKEGHAGLGIDVR 679
GNGLLV++L K G +G GIDVR
Sbjct: 252 GNGLLVHLLNKIGMSGYGIDVR 273
>Z47357-4|CAA87423.1| 345|Caenorhabditis elegans Hypothetical
protein ZK1128.4 protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 173 LESYIIFYNVTPSEVIQNTTPSFTYGIHVENDMIVLNAHCDDENSKSYMWLK 328
L + + F N + N F YG +V+N MI + C+D N+ S++ +K
Sbjct: 80 LRAIVSFCNAHLGQSANNQLLVFAYGRNVDNKMIYSSTRCEDRNA-SFLVVK 130
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 296 HHSVHSRQSYHSQHEYH 246
HHSV S S+HSQH +H
Sbjct: 146 HHSVASHHSHHSQHSHH 162
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 296 HHSVHSRQSYHSQHEYH 246
HHSV S S+HSQH +H
Sbjct: 146 HHSVASHHSHHSQHSHH 162
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 296 HHSVHSRQSYHSQHEYH 246
HHSV S S+HSQH +H
Sbjct: 146 HHSVASHHSHHSQHSHH 162
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 584 KKQTFVDLGCGNGLLVYILCKEGHAGLGIDV 676
K +D+GCG G+ ++ GH +G+DV
Sbjct: 53 KSGFLLDIGCGTGMSSEVILDAGHMFVGVDV 83
>AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical
protein Y39A1A.21a protein.
Length = 188
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEGHAGLGIDV 676
E +A + L L + KK T +DLG G+G +V +EG G+++
Sbjct: 43 EQLANVSRALSLATSSNSNKKGTLIDLGSGDGRVVLQCAREGFNSTGVEL 92
>Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical
protein F58E10.1b protein.
Length = 709
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 488 IWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGN 619
IW +CTD K++Y+ +AI S +K+Q ++LG N
Sbjct: 299 IWKKCTDDAKYMYQSIAIEASEAGSEGGGSPIKRQ-LLELGIDN 341
>Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical
protein F58E10.1a protein.
Length = 694
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 488 IWPECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGN 619
IW +CTD K++Y+ +AI S +K+Q ++LG N
Sbjct: 284 IWKKCTDDAKYMYQSIAIEASEAGSEGGGSPIKRQ-LLELGIDN 326
>Z66513-10|CAH19084.1| 488|Caenorhabditis elegans Hypothetical
protein F54D5.15b protein.
Length = 488
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 308 LSFHHHSVHSRQSYHSQHEYH 246
LS+HHH HS + +S + YH
Sbjct: 468 LSYHHHQPHSHMTTNSSYGYH 488
>Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical
protein F54D5.15c protein.
Length = 561
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 308 LSFHHHSVHSRQSYHSQHEYH 246
LS+HHH HS + +S + YH
Sbjct: 541 LSYHHHQPHSHMTTNSSYGYH 561
>Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical
protein F54D5.15a protein.
Length = 563
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 308 LSFHHHSVHSRQSYHSQHEYH 246
LS+HHH HS + +S + YH
Sbjct: 543 LSYHHHQPHSHMTTNSSYGYH 563
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 200 VTPSEVIQNTTPSFTYGI-----HVENDMIVLNAHCDDENSKSYMWLKNKLLPQFIKWTT 364
++ S + +T P F + H ND I + + + MW K+ +L K+
Sbjct: 3886 ISDSSITSSTRPHFVVPLPERVTHTVNDHITIKCKFSGQPLPAAMWEKDGVLLDLQKYQV 3945
Query: 365 ETESNNGKKKICTASL 412
TE KI +ASL
Sbjct: 3946 TTEDGTSILKIESASL 3961
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 200 VTPSEVIQNTTPSFTYGI-----HVENDMIVLNAHCDDENSKSYMWLKNKLLPQFIKWTT 364
++ S + +T P F + H ND I + + + MW K+ +L K+
Sbjct: 3886 ISDSSITSSTRPHFVVPLPERVTHTVNDHITIKCKFSGQPLPAAMWEKDGVLLDLQKYQV 3945
Query: 365 ETESNNGKKKICTASL 412
TE KI +ASL
Sbjct: 3946 TTEDGTSILKIESASL 3961
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 200 VTPSEVIQNTTPSFTYGI-----HVENDMIVLNAHCDDENSKSYMWLKNKLLPQFIKWTT 364
++ S + +T P F + H ND I + + + MW K+ +L K+
Sbjct: 3886 ISDSSITSSTRPHFVVPLPERVTHTVNDHITIKCKFSGQPLPAAMWEKDGVLLDLQKYQV 3945
Query: 365 ETESNNGKKKICTASL 412
TE KI +ASL
Sbjct: 3946 TTEDGTSILKIESASL 3961
>U39849-1|AAA81045.2| 332|Caenorhabditis elegans Serpentine
receptor, class h protein39 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 83 RKYCFEINILELFPKNYA 136
R +CF + ILELFP +YA
Sbjct: 17 RNFCFFLTILELFPTSYA 34
>AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical
protein Y73F8A.26 protein.
Length = 476
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 577 FSKETNICGSWMWQWFIGVYIM 642
FS E N CG W+ +WF G ++
Sbjct: 446 FSAEHNDCGEWLGKWFNGCAVV 467
>U58757-6|AAC47920.1| 656|Caenorhabditis elegans Hypothetical
protein C01B10.8 protein.
Length = 656
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 569 DRSLVKKQTFVDLGCGNGLLVYILCKEG-HAGLGIDV 676
D+ L K TF+ LGCGN L L G H IDV
Sbjct: 41 DKYLKPKDTFLQLGCGNSELATQLYDNGFHCIHSIDV 77
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 144 ALSA*FLGNNS-KIFISKQYFLIYECDLAMLLFPPNLYNYVLTI 16
A+S + G+ + K+ + QYFLIYE + F ++ NY+ +I
Sbjct: 103 AISTHYHGSQACKVHVENQYFLIYETPVQYDPFNMHMENYLSSI 146
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 293 DDENSKSYMWLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSKYFEKYNELKLKYG 472
D+E S Y K+ +P+ + T T+S+NGK + + + KY +Y + L+ G
Sbjct: 233 DEELSNMY---KDLNVPE--EHQTVTKSSNGKSALVDFGIWAQENEKYVNEYYSMALQIG 287
Query: 473 KDLVKIWPE 499
+ + PE
Sbjct: 288 HICLGLRPE 296
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 293 DDENSKSYMWLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSKYFEKYNELKLKYG 472
D+E S Y K+ +P+ + T T+S+NGK + + + KY +Y + L+ G
Sbjct: 233 DEELSNMY---KDLNVPE--EHQTVTKSSNGKSALVDFGIWAQENEKYVNEYYSMALQIG 287
Query: 473 KDLVKIWPE 499
+ + PE
Sbjct: 288 HICLGLRPE 296
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 293 DDENSKSYMWLKNKLLPQFIKWTTETESNNGKKKICTASLTLVSSSKYFEKYNELKLKYG 472
D+E S Y K+ +P+ + T T+S+NGK + + + KY +Y + L+ G
Sbjct: 233 DEELSNMY---KDLNVPE--EHQTVTKSSNGKSALVDFGIWAQENEKYVNEYYSMALQIG 287
Query: 473 KDLVKIWPE 499
+ + PE
Sbjct: 288 HICLGLRPE 296
>Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical
protein T07G12.6 protein.
Length = 600
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 464 KYGKDLVKIWPECTDPTKFVYEDVAIATYLL-LLWEDRSLVKKQTFVDLG 610
K GKDL K+W EC + + + LL +D+ + Q +D G
Sbjct: 535 KKGKDLAKVWDECFKKNRVLQHGSGTDSNLLHFSRQDKGSKRSQKSMDSG 584
>AC006641-12|AAF39810.1| 501|Caenorhabditis elegans Hypothetical
protein F45D11.16 protein.
Length = 501
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 398 CTASLTLVSSSKYFEKYNELK-LKYGKD-LVKIWPECTDPTK 517
C A++ + ++ E YNE+K +Y +D L+K+ + T+P K
Sbjct: 203 CVATIDTKTKERFEECYNEIKPERYVRDMLIKLESDVTNPLK 244
>AC006641-10|AAF39811.1| 501|Caenorhabditis elegans Hypothetical
protein F45D11.15 protein.
Length = 501
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 398 CTASLTLVSSSKYFEKYNELK-LKYGKD-LVKIWPECTDPTK 517
C A++ + ++ E YNE+K +Y +D L+K+ + T+P K
Sbjct: 203 CVATIDTKTKERFEECYNEIKPERYVRDMLIKLESDVTNPLK 244
>AC006641-8|AAF39822.1| 508|Caenorhabditis elegans Hypothetical
protein F45D11.14 protein.
Length = 508
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 398 CTASLTLVSSSKYFEKYNELK-LKYGKD-LVKIWPECTDPTK 517
C A++ + ++ E YNE+K +Y +D L+K+ + T+P K
Sbjct: 210 CVATIDTKTKERFEECYNEIKPERYVRDMLIKLESDVTNPLK 251
>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical protein
R05H10.6 protein.
Length = 1364
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 110 LELFPKNYADKASYQLIIINKLESYIIFYNVTPSEVI 220
L PK+ KA + ++ N ++ +IF+N + SE++
Sbjct: 1178 LTAIPKSVYYKAPHGIMSTNSIDLQVIFFNKSMSEIV 1214
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 527 EDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGLLVYILCKEG 652
++V TY ++ + L K + +D+G G G+L K G
Sbjct: 43 DEVRTTTYRNSIYHNSHLFKDKVVMDVGSGTGILSMFAAKAG 84
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 494 PECTDPTKFVYEDVAIATYLLLLWEDRSLVKKQTFVDLGCGNGL 625
P T K++Y+D + L L + +K + +D+GCGNGL
Sbjct: 9 PYSTAQQKWLYQDHLVLPTLEKLLKYN--LKDKKVLDIGCGNGL 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,463,041
Number of Sequences: 27780
Number of extensions: 318900
Number of successful extensions: 1057
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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