Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o19
(296 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 62 2e-09
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 39 0.019
UniRef50_A5K9Y6 Cluster: Ubiquitin carboxyl-terminal hydrolase f... 35 0.41
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 34 0.72
UniRef50_Q7QWC6 Cluster: GLP_177_679_2166; n=1; Giardia lamblia ... 33 0.96
UniRef50_Q0U2F5 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_Q2SSV1 Cluster: Lipoprotein, putative; n=1; Mycoplasma ... 32 2.2
UniRef50_Q4XSW2 Cluster: Putative uncharacterized protein; n=1; ... 32 2.2
UniRef50_A3U8W1 Cluster: Lipoprotein protein, putative; n=2; Fla... 32 2.9
UniRef50_A6REN3 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 2.9
UniRef50_A4IU78 Cluster: Putative uncharacterized protein; n=1; ... 31 3.9
UniRef50_Q0BZJ0 Cluster: TonB-dependent receptor; n=1; Hyphomona... 31 6.7
UniRef50_A3A5S8 Cluster: Putative uncharacterized protein; n=3; ... 31 6.7
UniRef50_A7EQP1 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q6CYE0 Cluster: Similar to sp|P43613 Saccharomyces cere... 30 8.9
UniRef50_A7I602 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +1
Query: 127 IAVGAPRYARNVDVYDDLQLESIRQYLKSASERNFEKTARNDNPL 261
+AVGAP + RNVD++DDL LESIR+++KS SER F+K R+DN L
Sbjct: 850 LAVGAPWFVRNVDLHDDLGLESIRKHMKSVSERYFDKAMRHDNRL 894
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 39.1 bits (87), Expect = 0.019
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 136 GAPRYARNVDVYDDLQLESIRQYLKSASERNFEKTARNDNPL 261
G P Y R VD++ +L++ SI Y+KS + FEK A + +PL
Sbjct: 64 GTPWYIRRVDLHRNLEIPSIWTYVKSLTISYFEKAANHPSPL 105
>UniRef50_A5K9Y6 Cluster: Ubiquitin carboxyl-terminal hydrolase
family 2, putative; n=2; Plasmodium|Rep: Ubiquitin
carboxyl-terminal hydrolase family 2, putative -
Plasmodium vivax
Length = 3000
Score = 34.7 bits (76), Expect = 0.41
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 KIFRDNPSPREAAFETSLSIAVGAPRYARNVDVYDDLQ-LESIRQYLKSASERNFEKTAR 246
+++ DN + + + + V + + VY+ + L+ ++ K A+ER E+T
Sbjct: 635 EVYYDNSLYKSEGYNNEMVMTVNCKKNKKKGMVYESKKNLKKKKKIFKYANERKVEQTEN 694
Query: 247 NDNPLNPLTQS 279
ND+ ++PL+ S
Sbjct: 695 NDHVMSPLSSS 705
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 33.9 bits (74), Expect = 0.72
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 79 RDNPSPREAAFETSLSIAVGAPRYARNVDVYDDLQLESIRQYLKSASERNFEKTARNDNP 258
R N + A L I GAP Y RN +++ DL+++ + + + + EK + NP
Sbjct: 806 RSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNP 865
Query: 259 L 261
L
Sbjct: 866 L 866
>UniRef50_Q7QWC6 Cluster: GLP_177_679_2166; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_177_679_2166 - Giardia lamblia ATCC
50803
Length = 495
Score = 33.5 bits (73), Expect = 0.96
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 115 TSLSIAVGAP-RYARNVDVYDDLQLESIR 198
T L I + AP RY N+D+YD +QLE+ R
Sbjct: 150 TDLCITISAPERYVSNIDLYDAVQLENAR 178
>UniRef50_Q0U2F5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1037
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 64 ISKIFRDNPSPREAAFETSLSIAVGAPRYARNVDVYDDLQLESIRQYLKSASERNFEKTA 243
IS+ F + + A + L+ G RY+ N +++D LE R K+ R E+TA
Sbjct: 174 ISQRFPEPETDPAAERQKRLAQVGGNKRYSPNSEIWDRFMLEDDRAKEKALVLRWLEQTA 233
Query: 244 RND 252
RND
Sbjct: 234 RND 236
>UniRef50_Q2SSV1 Cluster: Lipoprotein, putative; n=1; Mycoplasma
capricolum subsp. capricolum ATCC 27343|Rep:
Lipoprotein, putative - Mycoplasma capricolum subsp.
capricolum (strain California kid / ATCC27343 / NCTC
10154)
Length = 276
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 118 SLSIAVGAPRYAR-NVDVYDDLQLESIRQYLKSASERNFEKTARNDNPLNPLT 273
SL + +G P+Y + +++V ++L LESI++YLK + D L LT
Sbjct: 120 SLELELGKPKYEKISINVKNNLSLESIQKYLKDTFGYTDQNINEVDIKLEQLT 172
>UniRef50_Q4XSW2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 470
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 145 RYARNVDVYDDLQLESIRQYLKSASERNFEKTARNDN 255
RY RN D+YDD + E R+Y +E+ +NDN
Sbjct: 333 RYFRNKDIYDDKKYEKKRKY---GERDKYERKYKNDN 366
>UniRef50_A3U8W1 Cluster: Lipoprotein protein, putative; n=2;
Flavobacteriaceae|Rep: Lipoprotein protein, putative -
Croceibacter atlanticus HTCC2559
Length = 277
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 55 FMKISKIFRDNPSPREAAFETSLSIAVGAPRYARNVDVYD-DLQLESIRQYLKSASERNF 231
F + +K + D+ EAAF+++ S G+PRY ++D D D L+ ++ Y + E F
Sbjct: 103 FERFTKAYPDSDRVEEAAFKSARSYYEGSPRY--SLDQADTDKALDKLQLYFVTYPEGQF 160
Query: 232 EKTA 243
+ A
Sbjct: 161 IEEA 164
>UniRef50_A6REN3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 132
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 94 PREAAFETSLSIAVGAPRYARNVDVYDDLQLE 189
PREA F+ +L A+G RY+ ++VY+ +LE
Sbjct: 84 PREAQFQVNLFQALGGNRYSPTIEVYNVDELE 115
>UniRef50_A4IU78 Cluster: Putative uncharacterized protein; n=1;
Yersinia ruckeri|Rep: Putative uncharacterized protein -
Yersinia ruckeri
Length = 143
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 133 VGAPRYARNVDVYDDLQLESIRQYLKSASERNFEKTARND 252
+G+ A + DV +D+Q E IR LK+ E FEKT + +
Sbjct: 105 IGSEAVATSFDV-NDIQDEEIRNTLKTMFEEEFEKTVKGE 143
>UniRef50_Q0BZJ0 Cluster: TonB-dependent receptor; n=1; Hyphomonas
neptunium ATCC 15444|Rep: TonB-dependent receptor -
Hyphomonas neptunium (strain ATCC 15444)
Length = 827
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 73 IFRDNPSPREAAFETSLSIAVGAPRYARNVDVYDDLQLESIR 198
+ D +PR A F+ +SI G P YA ++ +YD ++E ++
Sbjct: 99 VVADGGAPRVAIFQNGVSI--GTPGYATSIAIYDVERVEVVK 138
>UniRef50_A3A5S8 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 735
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 131 AILNEVSNAASRGDGLSRNIFEIFIN*MSKNHA 33
A+L + +AA DG R+ F I ++ MSK HA
Sbjct: 62 ALLRAIKSAARASDGAIRDAFRILLSLMSKPHA 94
>UniRef50_A7EQP1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1570
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 142 PRYARNVDVYDDLQLESIRQYLKSASERNFEKTARNDNPLNPLT 273
PRY R + YDDL IR+Y +S+ K+ R D PL+ ++
Sbjct: 1146 PRYERTIRTYDDL-TTPIREYATVSSQS--YKSNRQDEPLSAVS 1186
>UniRef50_Q6CYE0 Cluster: Similar to sp|P43613 Saccharomyces
cerevisiae YFR041c singleton; n=1; Kluyveromyces
lactis|Rep: Similar to sp|P43613 Saccharomyces
cerevisiae YFR041c singleton - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 277
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 145 RYARNVDVYDDLQLESIRQYLKSASERNFEKTARNDNP 258
+Y N+D Y L+L ++Q + +NF+K A+ +P
Sbjct: 41 KYGSNMDFYQFLKLPKLKQSTSAEITKNFKKLAKKYHP 78
>UniRef50_A7I602 Cluster: Putative uncharacterized protein; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Putative
uncharacterized protein - Methanoregula boonei (strain
6A8)
Length = 133
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +1
Query: 79 RDNPSPREAAFETSLSIAVGAPRYARNVDVYDDLQLESIRQYLKSASERNFEKTARNDNP 258
RDNP + + L++ G P+ +RN+ Y+ +++ IR+ L +F++ R++
Sbjct: 24 RDNPILIYRSRQNFLNMPRGRPKGSRNLSAYERGKVKRIRELLSQKGIGDFDR-LRDNQV 82
Query: 259 LNPL 270
LN +
Sbjct: 83 LNTI 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,494,854
Number of Sequences: 1657284
Number of extensions: 3284716
Number of successful extensions: 8586
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8585
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 10380836353
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -