Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2o19
         (296 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   0.60 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   2.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   3.2  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   4.2  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   4.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   7.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   7.4  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 0.60
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 151 ARNVDVYDDLQLESIRQYLKSASERNFEKTARNDN 255
           +RN+D+  D  L ++ QYL  + + N   +  +D+
Sbjct: 47  SRNMDIEHDPGLAAVLQYLIRSGQLNIISSDHDDS 81


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 209 SQRQSATSRKRRETIILLTLLP 274
           +QR+ A   KRR   ++  +LP
Sbjct: 741 AQRERAADMKRRNGALIYNILP 762


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 142 PRYARNVDVYDDLQLES 192
           P++ RN+D Y++  L++
Sbjct: 365 PKFPRNIDEYNNNDLDT 381


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 190 SIRQYLKSASERNFEKTAR 246
           S R+Y +++ ER+ +KT R
Sbjct: 293 SYRKYRETSKERSRDKTER 311


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
          protein.
          Length = 190

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 36 RLLSSIHYCH 7
          ++L S+H+CH
Sbjct: 17 QILESVHHCH 26


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 184 LESIRQYLKSASERNFEKTARNDNPL 261
           L  IRQY  +    NF  T   D P+
Sbjct: 487 LIKIRQYRLNHKPFNFHITINADKPM 512


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 184 LESIRQYLKSASERNFEKTARNDNPL 261
           L  IRQY  +    NF  T   D P+
Sbjct: 487 LIKIRQYRLNHKPFNFHITINADKPM 512


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,616
Number of Sequences: 438
Number of extensions: 1226
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)