Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2o18
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    29   0.18 
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    25   2.3  
AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin preprop...    24   4.0  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 452 TRWGSISREEKYEDKEKLIRAIDDNVIGKGN 360
           T WGS    ++ ED  +LI+++   VI  GN
Sbjct: 149 TEWGSARNSQRGEDLLQLIQSVQLQVINSGN 179


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 410 CLRIFPHGRSTPILWGTEHFQGKG 481
           C + F HG  + ++WG   + G G
Sbjct: 92  CFKTFKHGGGSLMVWGCFSYYGMG 115


>AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin
           preproprotein protein.
          Length = 193

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 348 PTKRIAFANNIVVDGSDQLLLVFVFFLTGDRPPS 449
           P     FA++  VD  DQ+      FLTG R P+
Sbjct: 107 PATADRFADDPGVDEQDQMRFSLEGFLTGARTPT 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,200
Number of Sequences: 2352
Number of extensions: 15598
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)