Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2o16
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070575-1|AAL48046.1|  532|Drosophila melanogaster RE12073p pro...   136   4e-32
AE014297-1620|AAN14341.1|  532|Drosophila melanogaster CG12360-P...   136   4e-32
AE014297-1619|AAF54893.1|  532|Drosophila melanogaster CG12360-P...   136   4e-32
AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA...    24   6.7  

>AY070575-1|AAL48046.1|  532|Drosophila melanogaster RE12073p
           protein.
          Length = 532

 Score =  136 bits (328), Expect = 4e-32
 Identities = 62/163 (38%), Positives = 106/163 (65%)
 Frame = +1

Query: 214 DVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSX 393
           +  Q+LP + TLL     + V L+GT HFS++S +DVS +++ + P+ ++VELC  R+  
Sbjct: 233 EFEQNLPSTVTLLNTPFGSKVYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHI 292

Query: 394 XXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRA 573
                      AK+ +  K++  +     + G+   +LL+  A IAK+LG+APGGEFRRA
Sbjct: 293 LKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRA 352

Query: 574 YHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYELGQVLYHIS 702
           + E+ K+PGC L+LGDRPI+IT+ RA ++LS+++  ++++ ++
Sbjct: 353 FEEIHKLPGCILHLGDRPIRITLYRALRALSMWQTMKLVWRLT 395


>AE014297-1620|AAN14341.1|  532|Drosophila melanogaster CG12360-PB,
           isoform B protein.
          Length = 532

 Score =  136 bits (328), Expect = 4e-32
 Identities = 62/163 (38%), Positives = 106/163 (65%)
 Frame = +1

Query: 214 DVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSX 393
           +  Q+LP + TLL     + V L+GT HFS++S +DVS +++ + P+ ++VELC  R+  
Sbjct: 233 EFEQNLPSTVTLLNTPFGSKVYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHI 292

Query: 394 XXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRA 573
                      AK+ +  K++  +     + G+   +LL+  A IAK+LG+APGGEFRRA
Sbjct: 293 LKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRA 352

Query: 574 YHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYELGQVLYHIS 702
           + E+ K+PGC L+LGDRPI+IT+ RA ++LS+++  ++++ ++
Sbjct: 353 FEEIHKLPGCILHLGDRPIRITLYRALRALSMWQTMKLVWRLT 395


>AE014297-1619|AAF54893.1|  532|Drosophila melanogaster CG12360-PA,
           isoform A protein.
          Length = 532

 Score =  136 bits (328), Expect = 4e-32
 Identities = 62/163 (38%), Positives = 106/163 (65%)
 Frame = +1

Query: 214 DVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSX 393
           +  Q+LP + TLL     + V L+GT HFS++S +DVS +++ + P+ ++VELC  R+  
Sbjct: 233 EFEQNLPSTVTLLNTPFGSKVYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHI 292

Query: 394 XXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRA 573
                      AK+ +  K++  +     + G+   +LL+  A IAK+LG+APGGEFRRA
Sbjct: 293 LKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRA 352

Query: 574 YHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYELGQVLYHIS 702
           + E+ K+PGC L+LGDRPI+IT+ RA ++LS+++  ++++ ++
Sbjct: 353 FEEIHKLPGCILHLGDRPIRITLYRALRALSMWQTMKLVWRLT 395


>AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA
            protein.
          Length = 1765

 Score = 23.8 bits (49), Expect(2) = 6.7
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 436  NFLHLPKTSFRLVPIMILFGDKVLPKYHWDSVSLLSLKHLQ 314
            NF+HL  +  R +  +  +GD+++     D   + SLK +Q
Sbjct: 1369 NFVHLYISLNREIVFLYNYGDEIVNLTLLDDTLMASLKSIQ 1409



 Score = 23.4 bits (48), Expect(2) = 6.7
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -3

Query: 697  CDTGL-DPARRHLATEKLVLLLFESVDLRDTIYIQEFFASRDMLSGILLQEQHLAL*LY 524
            C+T + + A   +  E  ++  + SV     I +      RD+L GIL Q+  + L  Y
Sbjct: 1296 CETNINEKALTFINRESFLMRNYLSVGATPVILMHGINGERDVLKGILNQDLLINLRTY 1354


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,995,903
Number of Sequences: 53049
Number of extensions: 624178
Number of successful extensions: 1157
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)