Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o13
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0349 + 2776093-2776566,2778211-2778729,2778813-2779048,277... 106 2e-23
01_01_0350 + 2782189-2782650,2783778-2783798,2787172-2787690,278... 100 1e-21
04_04_0108 - 22830485-22830706,22830817-22830954,22831091-228313... 99 2e-21
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 33 0.32
09_02_0205 + 5772442-5772831 32 0.56
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 31 0.97
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 30 1.7
05_01_0173 - 1199668-1199685,1199907-1199969,1200277-1200379,120... 30 1.7
04_04_0733 + 27639581-27641257 30 1.7
09_04_0457 - 17736158-17737336 30 2.2
09_01_0128 + 1932721-1935181,1936099-1936256 29 3.0
09_04_0091 - 14529255-14529935,14531220-14531630 29 3.9
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 3.9
06_01_0676 + 4945361-4945531,4945632-4945811,4947145-4947300,494... 29 3.9
03_05_0260 + 22468243-22468292,22469125-22469125,22469130-224692... 29 3.9
01_06_1428 - 37301697-37302175,37302300-37302471,37302570-373034... 29 3.9
08_02_0638 + 19603399-19604679 29 5.2
07_03_1162 + 24437396-24438652 29 5.2
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 5.2
03_05_0018 - 19831004-19831012,19831106-19831567,19832001-198321... 29 5.2
01_05_0403 - 21817691-21817747,21818070-21818171,21818184-218182... 29 5.2
11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075 28 6.9
11_06_0364 - 22727978-22729149,22730475-22730727,22731628-227319... 28 6.9
04_03_0971 - 21340829-21340996,21341169-21341222,21341317-213415... 28 6.9
03_06_0065 - 31399791-31399874,31399956-31400165,31400407-314005... 28 6.9
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 28 6.9
08_02_0927 - 22685348-22685635,22685823-22685972,22686224-22687042 28 9.1
02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404 28 9.1
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 28 9.1
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 28 9.1
>01_01_0349 +
2776093-2776566,2778211-2778729,2778813-2779048,
2779135-2779410,2779447-2779549,2780058-2780330
Length = 626
Score = 106 bits (255), Expect = 2e-23
Identities = 58/148 (39%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Frame = +3
Query: 279 AVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDASTGRV 458
AVAA+ C+ VG L G A DAA+A C G+ G+GGG DA++G
Sbjct: 84 AVAADDGRCSEVGAAALRAGGHAADAAVAAALCLGVVHPMSSGVGGGAFIVTRDAASGDA 143
Query: 459 RVLNARERAPAAMTLNMYEN--ASSTVGGLAIAVPGELRGYGALYQEYGRLPWRELVQPT 632
+ARE APAA T +MY S G LA+ VPGEL G A + YGRLPW++L P
Sbjct: 144 VAFDARETAPAAATPDMYAGNPTSKYKGALAMGVPGELAGLHAAWSRYGRLPWKDLFAPA 203
Query: 633 AELCRRGHRVTEYMGRVLQTFSDRIMAE 716
+L R G V + L+ ++A+
Sbjct: 204 IKLARDGFTVVPPVAGALKEAERDVLAD 231
>01_01_0350 +
2782189-2782650,2783778-2783798,2787172-2787690,
2787780-2788015,2788110-2788242,2788482-2788547,
2789200-2789454
Length = 563
Score = 100 bits (239), Expect = 1e-21
Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Frame = +3
Query: 279 AVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDASTGRV 458
AVA + C+ VG L G AVDAA+A C G+ G+GGG DA++G
Sbjct: 80 AVATDDGRCSEVGAAALRAGGHAVDAAVAATLCLGVVHPMSSGVGGGAFIVARDAASGDA 139
Query: 459 RVLNARERAPAAMT-------LNMYEN--ASSTVGGLAIAVPGELRGYGALYQEYGRLPW 611
+ARE APAA T +MY S G LA+ +PGEL G A + YGRLPW
Sbjct: 140 VAFDARETAPAAATPLLRLCLEDMYAGNPTSKYKGALAMGIPGELAGLHAAWSRYGRLPW 199
Query: 612 RELVQPTAELCRRGHRVTEYMGRVLQTFSDRIMAE 716
++L P +L R G V Y+ L+ ++A+
Sbjct: 200 KDLFAPAIKLARDGFTVVPYLEIALKKTERDVLAD 234
>04_04_0108 -
22830485-22830706,22830817-22830954,22831091-22831355,
22831490-22831725,22831906-22832421,22834960-22835300,
22835453-22835459
Length = 574
Score = 99 bits (238), Expect = 2e-21
Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 2/146 (1%)
Frame = +3
Query: 279 AVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDASTGRV 458
AVAA+ C+ +GR+ L G+AVDAA+A C G+ G+GGG V A G
Sbjct: 43 AVAADDGRCSRIGRDALRDGGNAVDAAVAASLCLGVVSPASSGVGGGAFMLVRLAD-GTA 101
Query: 459 RVLNARERAPAAMTLNMY--ENASSTVGGLAIAVPGELRGYGALYQEYGRLPWRELVQPT 632
++RE AP A + +MY G L+IAVPGE+ G ++ +G+LPW+ LV P
Sbjct: 102 LAYDSRETAPLAASQDMYGGNETLKARGALSIAVPGEIAGLYEAWKRHGKLPWKRLVMPA 161
Query: 633 AELCRRGHRVTEYMGRVLQTFSDRIM 710
A+L R RV+ Y+ + ++ D I+
Sbjct: 162 AKLA-RAFRVSPYLRKQMEATRDGIL 186
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -2
Query: 490 AGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEP 338
A A S + S+ +PV + AR P PSP A PS +N + A S ++P
Sbjct: 6 AAAASGSASSSRKPVPVAAAAARRPAPSPAAAAAPAPSPSNPS-AVSDSDP 55
>09_02_0205 + 5772442-5772831
Length = 129
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 487 GARSLALSTLTRPVLASYTVARNPPPSPMHCAQD 386
GA +LAL L VL TV R PPP P A++
Sbjct: 33 GAAALALRRLPFLVLGKVTVERRPPPPPASTAEE 66
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 31.1 bits (67), Expect = 0.97
Identities = 28/79 (35%), Positives = 35/79 (44%)
Frame = +3
Query: 261 VRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYD 440
V+Y+ A V A G + G I + S+ AA C CA G G G + +V D
Sbjct: 19 VKYKSARVGAAGLD--PKGLRISCSSSSSSLAAGGGDGCRDAGCASSSGRGSGVVGSVGD 76
Query: 441 ASTGRVRVLNARERAPAAM 497
GR RERA AAM
Sbjct: 77 GWWGRRG--GQRERAVAAM 93
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 258 HVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCE 380
H +A + E ++GRE+L NG D +A FC+
Sbjct: 332 HASLGKAWTSKKAREVVSLGRELLGGNGILADFLVAKAFCD 372
>05_01_0173 -
1199668-1199685,1199907-1199969,1200277-1200379,
1201408-1201514
Length = 96
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 500 GHGGGSSFSGVEYPHPSRARVVHGR 426
GHGGG+++ G PH R V G+
Sbjct: 5 GHGGGTTYKGYTIPHNKRWHTVAGK 29
>04_04_0733 + 27639581-27641257
Length = 558
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Frame = -2
Query: 565 SSPGTAIASPPTVDDAFSYMFRVMA-AGARSLALSTLTRP-VLASYTVARN--------- 419
SS + PP DD FR M A +L LS P +LAS R
Sbjct: 410 SSADHTASVPPLADDLVPLSFRPMLDAPEPALDLSIAANPPLLASAATVRPKVGGSSFHL 469
Query: 418 --PPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVA 305
PPP + + IPSQ N A A + ++ ++ L T A
Sbjct: 470 DAPPPVYIPSSPAIPSQRNKATATTGSQNANDAVGLSTAA 509
>09_04_0457 - 17736158-17737336
Length = 392
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Frame = +2
Query: 380 GDILRAMHGTRGRVPSDRVRREHGTGEGTQRQRTSSRRHD------PEHVRERIV 526
G + RA+ GR P+ R R H TG +S + PEHV ++
Sbjct: 241 GSLKRALRSKSGRAPAARFPRSHSTGHSLSSSAAASAGAERFTLRLPEHVLREVI 295
>09_01_0128 + 1932721-1935181,1936099-1936256
Length = 872
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 679 LPMYSVTRCPRRHNSAVGCTSSRHGKRPYSW 587
+P S ++ R HNS C SSRHG S+
Sbjct: 507 MPTTSYSKLERNHNSMSECGSSRHGGEKNSY 537
>09_04_0091 - 14529255-14529935,14531220-14531630
Length = 363
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/93 (31%), Positives = 38/93 (40%)
Frame = +3
Query: 390 CAQCMGLGGGFLATVYDASTGRVRVLNARERAPAAMTLNMYENASSTVGGLAIAVPGELR 569
C +G GG F ++A+ V R A AA E +S GG V G L
Sbjct: 32 CVDVVGQGGVF-GFGFEAAAAPVVTRQQRGGAAAA------EGSSRGGGGKPAVVSGLL- 83
Query: 570 GYGALYQEYGRLPWRELVQPTAELCRRGHRVTE 668
G+L E GR+ RE++ A R H E
Sbjct: 84 --GSLQAELGRVTAREIMDAKALAASRSHSEAE 114
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 421 NPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAH---SCP 293
+PPPSP A+D ++++ A AA+ A SS S A +CP
Sbjct: 162 SPPPSPAPVAKDAATKDDAAAAAAAAAAKESSASAELEAEMSGACP 207
>06_01_0676 +
4945361-4945531,4945632-4945811,4947145-4947300,
4947460-4947537,4964041-4964214
Length = 252
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -2
Query: 508 MFRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFS 329
M V +GA +A T+ +S+ R PPS C+ PS++ V AA+ P ++
Sbjct: 1 MSSVQLSGA-GVAAVAFTKNGASSFDGLRLAPPSVRVCSSRRPSRSLVVKAATVVTPKYT 59
Query: 328 SI 323
S+
Sbjct: 60 SL 61
>03_05_0260 +
22468243-22468292,22469125-22469125,22469130-22469285,
22469416-22469919
Length = 236
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 493 AAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISL 317
+ G+ + A ST T S R PPP P A D+ + A AA+ A +SL
Sbjct: 175 SGGSLTTATSTSTSSSTDSDGSLRQPPPCPRAMAFDVLHDGSTAAAAAAAPWLQQRLSL 233
>01_06_1428 -
37301697-37302175,37302300-37302471,37302570-37303403,
37303847-37304012,37304334-37304573,37304765-37304905,
37305623-37305735,37306549-37306614,37307242-37307480,
37307615-37307897
Length = 910
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 548 DRKPAHGRRCVLVHVQGHGGGSSFSGVEYPH 456
DR P+ R VLV ++ HG + G+ PH
Sbjct: 89 DRSPSDEWRMVLVDLRNHGRSAGIKGLRPPH 119
>08_02_0638 + 19603399-19604679
Length = 426
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 460 LTRPVLASYTVARNPP-PSPMHCAQDIPSQNNVAIAASTAEPFFSSISLP 314
L RP + + PP PSP + PS +N+AIA STA ++++ P
Sbjct: 201 LLRPFAQKHHPSPFPPFPSP---STSSPSPSNIAIATSTAAATTAAVAAP 247
>07_03_1162 + 24437396-24438652
Length = 418
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -1
Query: 506 VQGHGGGSSFSGVEYPH---PSRARVVHGR*EPAPESHALRARYPLTEQRRYRSIDSRAI 336
V G GGGS G E+P+ P R + P +R E+RR R + +
Sbjct: 35 VHGGGGGSEAEGEEFPYADVPRPGRKWERKPYVTPMKVLIRR---AKEERRARRENPCRV 91
Query: 335 LFKYLPPDGGALVP 294
L + PP+ G LVP
Sbjct: 92 LER--PPENGLLVP 103
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 502 RVMAAGARSLALSTLTRPVLASYTVARNPPPSP 404
R A A AL++ TRPV A V R P P+P
Sbjct: 110 RRRARDAELSALASATRPVTARAAVFREPSPAP 142
>03_05_0018 -
19831004-19831012,19831106-19831567,19832001-19832105,
19832187-19832279,19832490-19832540,19832759-19832874,
19832970-19833041,19833271-19833362,19833631-19833696,
19834028-19834035
Length = 357
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 207 STRPTTRCLAPKTGGGCRKIII*SCNEK*YQKR 109
ST +RC AP+ GGG RK+ I N K +KR
Sbjct: 73 STLLNSRCRAPRRGGGGRKVTI---NTKLVKKR 102
>01_05_0403 -
21817691-21817747,21818070-21818171,21818184-21818272,
21818612-21818714,21819938-21820223,21820577-21820725,
21821500-21821612,21821764-21821922,21822272-21822341
Length = 375
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -2
Query: 586 YSAP*PRSSPGTAIASPPTVDD-AFSYMFRVMAAGA--RSLALSTLTRPVLASYTVARNP 416
+S P R G A A P +D A V AGA R + RP +A T + +P
Sbjct: 188 FSQPLERGDGGDAEAVPALEEDTALEVEAEVEGAGAGRRWRRRAGQRRPAVAPPTPSAHP 247
Query: 415 PPSPMH 398
PP+ +H
Sbjct: 248 PPARLH 253
>11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075
Length = 479
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 300 ECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGG 419
+C E+LE++ VDA EG+S +G GGG
Sbjct: 111 QCVVERGEVLEEDDGIVDAGTLMPIQEGLSMVDEVGGGGG 150
>11_06_0364 - 22727978-22729149,22730475-22730727,22731628-22731963,
22732306-22732512,22734988-22735686,22736441-22736590,
22740204-22740962,22741023-22741235
Length = 1262
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 300 ECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGG 419
+C E+LE++ VDA EG+S +G GGG
Sbjct: 894 QCVVERGEVLEEDDGIVDAGTLMPIQEGLSMVDEVGGGGG 933
>04_03_0971 -
21340829-21340996,21341169-21341222,21341317-21341540,
21341936-21342239,21342341-21342439,21343177-21343314,
21343412-21343534,21343623-21343721
Length = 402
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2
Query: 646 RHNSAVG---CTSSRHGKRPYSWYSAP*PRSSPGTAIASPPTVDDAFSYMFRVMAAGARS 476
R N +G CT++RHG P ++A +S TA+ PPT + + ++ + +
Sbjct: 342 RANGGLGNGTCTTARHGGTPKGIFNA----TSGATALLRPPTATLQWQQLIILVPSTLAA 397
Query: 475 LALS 464
L LS
Sbjct: 398 LLLS 401
>03_06_0065 -
31399791-31399874,31399956-31400165,31400407-31400526,
31401166-31401225,31401670-31401879,31402512-31402587,
31403010-31403173,31403254-31403316,31403640-31403727,
31403810-31404460,31405102-31405149,31405334-31405902
Length = 780
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -2
Query: 502 RVMAAGARSLALSTLTRPVLASYTVARNP--PPSPMHCAQDIPSQNNVAIAASTAEPFFS 329
++M + RS S L PVL S +NP PPSPMH + +N+V+ F
Sbjct: 317 KIMGSQERSPRSSPLRSPVLRS----KNPSAPPSPMH--PKLFPENHVSRPEGNGSVNFH 370
Query: 328 SISLPTVAHS 299
+ LP + S
Sbjct: 371 PLPLPPASVS 380
>03_05_0967 + 29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 383 DILRAMHGTRGRVPSDRVRREHGTGEGTQRQRTSSRRHD 499
DI+ HG RGR +R +RE G +R+ ++R +
Sbjct: 974 DIVHGQHGYRGRDDPNRRKRERDDGIDQKRRDDNARMRE 1012
>08_02_0927 - 22685348-22685635,22685823-22685972,22686224-22687042
Length = 418
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 465 LNARERAPAAMTLNMYENASSTVGGLAIAVPG 560
L+ R APAA ++ + A++ V GL + VPG
Sbjct: 63 LSFRSSAPAAAISSVLKRAAAPVRGLGLRVPG 94
>02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404
Length = 635
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Frame = +3
Query: 516 NASSTVGGLAIAVPGELRGYGALYQE-------YGRLPWRELVQPTAELCRRGHRVTEYM 674
++S T+ G + V G G L + R WRE+ CR GH ++ Y
Sbjct: 414 HSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMERPVWREIPASWTPPCRLGHSLSVYD 473
Query: 675 GRVLQTF 695
GR + F
Sbjct: 474 GRKILMF 480
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 356 CDSDVVL*GDILRAMHGTRGRVPSDRVRREHGTGEGTQRQRTSSRRHD 499
CD D D+++ + G RVP D G G +++ + R D
Sbjct: 499 CDQDSKYAADLIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSD 546
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 258 HVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCE 380
H + + E ++GRE+L NG D +A FC+
Sbjct: 355 HASLGKGWTSRMAREVVSLGRELLGGNGILADFLVAKAFCD 395
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,951,186
Number of Sequences: 37544
Number of extensions: 472965
Number of successful extensions: 2039
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2035
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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