Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2o13
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   1.9  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   5.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.7  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 18/74 (24%), Positives = 31/74 (41%)
 Frame = -2

Query: 613 RHGKRPYSWYSAP*PRSSPGTAIASPPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASY 434
           ++G R  S+ +    +++P   ++ PP   D F Y      A A    L+ L   +L   
Sbjct: 39  QYGNRGSSFAAPALTQAAPAPVVSQPPATRDTFRY----NPASAAVTELARLIGSILGQQ 94

Query: 433 TVARNPPPSPMHCA 392
           + A    P  + CA
Sbjct: 95  SKAAVFSPVSIACA 108


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 550 PYPESYEATAHCTRSTDACRG 612
           PY   YE  A+ T ST+  RG
Sbjct: 191 PYYPKYEPDAYITASTERSRG 211


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 347 SRAILFKYLPPDGGALVPISSDGGA 273
           S  +LFKY P  G  +VP +   GA
Sbjct: 489 SEPVLFKYKPRPGMMVVPGAGASGA 513


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,391
Number of Sequences: 2352
Number of extensions: 16609
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)