Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o10
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0727 - 22564183-22564815,22564906-22565073,22565264-225653... 32 0.49
03_02_0697 - 10487661-10488342,10490474-10490556 31 0.65
02_05_1219 + 35011571-35011897,35012008-35013780,35013915-350140... 29 3.5
02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173... 29 3.5
11_01_0752 - 6327269-6327764,6328571-6328839 29 4.6
03_02_0649 - 10162202-10162366,10162455-10162533,10162614-101626... 28 6.0
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 28 8.0
11_01_0261 - 1989988-1990090,1990232-1990368,1990483-1990589,199... 28 8.0
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 28 8.0
03_05_0811 - 27867228-27867701,27868313-27868497,27869123-27869393 28 8.0
02_05_0813 - 31951168-31951722 28 8.0
02_05_0550 + 29904733-29905596 28 8.0
01_05_0502 + 22771428-22771466,22772327-22772430,22773043-227731... 28 8.0
01_01_1098 - 8691312-8692430,8692640-8693509,8694522-8696105,869... 28 8.0
>12_02_0727 -
22564183-22564815,22564906-22565073,22565264-22565382,
22565796-22565898,22566702-22566974,22567088-22567279,
22568289-22568615
Length = 604
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 248 SIVPRKLDFSNLD-DDDGIRDESQAPVSHSPPYKRVRALR-LFDSPHTPKTLLEKCSTPT 421
SI +LD D DDD R E++ ++ + + V L L D+PH P + + P
Sbjct: 459 SISMEELDLQESDNDDDTDRGENEPALNETDEDQAVELLETLTDNPHEPSSSSQSQDPPQ 518
Query: 422 HHPP 433
+PP
Sbjct: 519 LYPP 522
>03_02_0697 - 10487661-10488342,10490474-10490556
Length = 254
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Frame = +1
Query: 397 LREVFDTD------SSSAQDETVPAQDQRANRNAIRLEPPPPS---AIW*RRQ--RARQS 543
LRE F+TD S+SA T +N + PPPPS +W R+ RA +S
Sbjct: 187 LREYFNTDLTVTRLSASAAKTTAAISSSNSNHASSSAPPPPPSKPKCLWQSRRADRAHKS 246
Query: 544 TPG 552
PG
Sbjct: 247 LPG 249
>02_05_1219 +
35011571-35011897,35012008-35013780,35013915-35014068,
35014158-35014801
Length = 965
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 325 ISQPTL*ESQSLEVVRQSSHSKDALREVFDTDSSSAQDETVPAQDQRA 468
+ +P L +SQ +++R S S A + DS SA DETVP+ + A
Sbjct: 369 VLKPGLVKSQEPKILRSPSSSSTAADS--EDDSMSAVDETVPSSRRLA 414
>02_04_0001 -
18816492-18816741,18816881-18817050,18817244-18817388,
18817495-18817565,18817910-18817993,18818103-18818222,
18818310-18818480,18818955-18819044,18821893-18821985,
18822073-18822405
Length = 508
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 421 SSSAQDETVPAQDQRANRNAIRLEPPPP--SAIW*RRQRARQSTPGRTGRVPADRKAS 588
+++A D ++PA + A + PPPP S++ R + PG GR ADR +S
Sbjct: 27 AAAAADASIPAPPEGAGDVSPPSPPPPPPPSSVQSRAHERAREQPGDGGR-GADRSSS 83
>11_01_0752 - 6327269-6327764,6328571-6328839
Length = 254
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -1
Query: 563 RPVRPGVDCRARCRRHQMADGGGGSSLMAFLFAR 462
RP PG R R RH A GGGG A + +R
Sbjct: 155 RPRLPGARRRGRAGRHAEAAGGGGGGDAASVASR 188
>03_02_0649 -
10162202-10162366,10162455-10162533,10162614-10162670,
10162741-10162847,10163365-10163580,10163690-10163734,
10164100-10164258,10164714-10164818,10164902-10165084,
10165490-10165546,10165625-10165720,10166970-10167104,
10167188-10167262,10167380-10167479,10167682-10167842,
10167921-10168068,10168706-10169111,10169794-10169860,
10169953-10170162,10170570-10170711,10170809-10170870,
10170965-10171037,10171876-10171985,10172087-10172227
Length = 1032
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 95 FLYVETDMTEWYRMKTGLNNKHNSSELSVETSCDMSDPFNIFSDN----LSPIPASIV 256
F+Y TDM EW+ +++ N + + + F I DN L+P ASI+
Sbjct: 406 FIYTATDMNEWHSNPESFHHEQNLLQCTEKRRPCAEALFIILFDNYGVQLAPFVASII 463
>12_01_0433 -
3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 542 DCRARCRRHQMADGGGGSSLMAFLFAR*SWAGT 444
+ +A C+RH ++ GG ++L+A L A S A T
Sbjct: 12 ELQALCKRHGLSAGGSNAALVARLAATLSGAAT 44
>11_01_0261 -
1989988-1990090,1990232-1990368,1990483-1990589,
1990708-1990786,1990952-1991038,1991688-1991966,
1992109-1992822
Length = 501
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 587 PIANINPFTPDGQALNKKKR 646
P+AN+ PFT GQAL +K+
Sbjct: 223 PLANLLPFTTYGQALKARKK 242
>07_03_1555 - 27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = -2
Query: 598 VGNRTPYGQPGLVQFVRG*TAERAVVVTRWRMEVVARA*WHSCLHVDLG 452
VGN YG G FVRG T ER V VV H C ++ G
Sbjct: 1463 VGNTCLYGATGGQVFVRGKTGERFAVRNSLGQAVVEGTGDHCCEYMTGG 1511
>03_05_0811 - 27867228-27867701,27868313-27868497,27869123-27869393
Length = 309
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -1
Query: 581 LRSAGTRPVRPGVDCRARCRRHQM---ADGGG 495
L AG VRPG+ C CRR ++ D GG
Sbjct: 250 LGEAGAGEVRPGISCGFGCRRPRIGGRVDSGG 281
>02_05_0813 - 31951168-31951722
Length = 184
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 533 ARCRRHQMADGGGG 492
ARCRRH+ GGGG
Sbjct: 11 ARCRRHRQRGGGGG 24
>02_05_0550 + 29904733-29905596
Length = 287
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 388 KDALREVFDTDSSSAQDETVPAQDQRANRNAIR 486
KDALRE +S A + A+ +RA R+A+R
Sbjct: 76 KDALREALADATSDAAAARIRAEAERAVRDAVR 108
>01_05_0502 +
22771428-22771466,22772327-22772430,22773043-22773129,
22773212-22773287,22773393-22773467,22773639-22773692,
22773745-22773918,22774002-22774061,22774135-22774251,
22774448-22774542,22774811-22775013,22775177-22775274,
22775451-22775587,22776154-22776219,22776300-22776465,
22776537-22776659,22776763-22776845,22776943-22777084,
22777334-22777363,22777587-22777657,22777742-22778333
Length = 863
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 254 VPRKLDFSNLDDDDGIRDESQAPVSHSPPYKRVRALRLFDSP 379
+ R LD SN D + APVS +P V+ R D P
Sbjct: 759 IERHLDVSNGDAEASTEAAEAAPVSSAPSSDEVQTERTADEP 800
>01_01_1098 -
8691312-8692430,8692640-8693509,8694522-8696105,
8696199-8696258,8696336-8696414,8696494-8696555,
8697129-8697204,8697367-8697419,8698181-8698270,
8698411-8698458
Length = 1346
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 346 ESQSLEVVRQSSHSKDALREVFD--TDSSSAQDETVPAQDQRANRNAIRLEPPPPSAIW* 519
E + L + ++ + D TD + ET+ + + N + + PPS
Sbjct: 411 EDEKLSTQGTDGNEENCMSNQMDMLTDEGPVKAETMIKTEHNCSEN-LDVVATPPSICMR 469
Query: 520 RRQRARQSTPGRTGRVPADRKASY 591
+ QRA+ ++ G P+D A++
Sbjct: 470 KAQRAKTTSGAAAGSEPSDISAAF 493
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,586,305
Number of Sequences: 37544
Number of extensions: 432468
Number of successful extensions: 1465
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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