Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o10
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118942-1|AAM50802.1| 609|Drosophila melanogaster LD27552p pro... 47 2e-05
AE014134-1187|AAF52453.2| 609|Drosophila melanogaster CG4488-PA... 47 2e-05
U17223-1|AAC46913.2| 609|Drosophila melanogaster Wee1 kinase pr... 47 3e-05
AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-P... 31 1.1
BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p pro... 29 6.0
AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquit... 29 6.0
AF416571-1|AAL09691.1| 1061|Drosophila melanogaster ubiquitin-pr... 29 6.0
AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin... 29 6.0
AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA... 29 6.0
>AY118942-1|AAM50802.1| 609|Drosophila melanogaster LD27552p
protein.
Length = 609
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/122 (32%), Positives = 54/122 (44%)
Frame = +2
Query: 281 LDDDDGIRDESQAPVSHSPPYKRVRALRLFDSPHTPKTLLEKCSTPTHHPPRTRLFPPKI 460
LD G ++ VS SPP ++VRALRLF +P TPKT+L+K +T + +
Sbjct: 71 LDSKIG-KEGGDGDVSMSPPCQKVRALRLFSTPATPKTILQKSTTQCSN--HLSAAAAAV 127
Query: 461 NVQTXXXXXXXXXXXXXXXXXXXALGSLPPDELDESRLTVRRPIANINPFTPDGQALNKK 640
N SLP L +L + AN+NPFTPD + K
Sbjct: 128 NASRRSDDLFRLSERPR---------SLP---LHNRKLPT-QDTANVNPFTPDSLMAHNK 174
Query: 641 KR 646
KR
Sbjct: 175 KR 176
>AE014134-1187|AAF52453.2| 609|Drosophila melanogaster CG4488-PA
protein.
Length = 609
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/122 (32%), Positives = 54/122 (44%)
Frame = +2
Query: 281 LDDDDGIRDESQAPVSHSPPYKRVRALRLFDSPHTPKTLLEKCSTPTHHPPRTRLFPPKI 460
LD G ++ VS SPP ++VRALRLF +P TPKT+L+K +T + +
Sbjct: 71 LDSKIG-KEGGDGDVSMSPPCQKVRALRLFSTPATPKTILQKSTTQCSN--HLSAAAAAV 127
Query: 461 NVQTXXXXXXXXXXXXXXXXXXXALGSLPPDELDESRLTVRRPIANINPFTPDGQALNKK 640
N SLP L +L + AN+NPFTPD + K
Sbjct: 128 NASRRSDDLFRLSERPR---------SLP---LHNRKLPT-QDTANVNPFTPDSLMAHNK 174
Query: 641 KR 646
KR
Sbjct: 175 KR 176
>U17223-1|AAC46913.2| 609|Drosophila melanogaster Wee1 kinase
protein.
Length = 609
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/115 (32%), Positives = 51/115 (44%)
Frame = +2
Query: 302 RDESQAPVSHSPPYKRVRALRLFDSPHTPKTLLEKCSTPTHHPPRTRLFPPKINVQTXXX 481
++ VS SPP ++VRALRLF +P TPKT+L+K +T + +N
Sbjct: 77 KEGGDGDVSMSPPCQKVRALRLFSTPATPKTILQKSTTQCSN--HLSAAAAAVNASRRSD 134
Query: 482 XXXXXXXXXXXXXXXXALGSLPPDELDESRLTVRRPIANINPFTPDGQALNKKKR 646
SLP L +L + AN+NPFTPD + KKR
Sbjct: 135 DLFRLSERPR---------SLP---LHNRKLPT-QDTANVNPFTPDSLMAHNKKR 176
>AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-PA
protein.
Length = 1037
Score = 31.5 bits (68), Expect = 1.1
Identities = 25/91 (27%), Positives = 37/91 (40%)
Frame = +2
Query: 149 NNKHNSSELSVETSCDMSDPFNIFSDNLSPIPASIVPRKLDFSNLDDDDGIRDESQAPVS 328
NN +NS S SC+ S + SDN A+ V K +++ L+ + R A
Sbjct: 143 NNINNSCNNSSNISCNNSSNTSCNSDNTGDNSATEVATKCEYAQLEHE---RQSVSAGAY 199
Query: 329 HSPPYKRVRALRLFDSPHTPKTLLEKCSTPT 421
PP V + + + K CS PT
Sbjct: 200 LQPPNVTVSSSSTSSNNNNGKRGSSACSIPT 230
>BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p
protein.
Length = 1061
Score = 29.1 bits (62), Expect = 6.0
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Frame = +2
Query: 146 LNNKHNSSELSVETSCDMSDPFNIFS----DNLS---PIPASIVPRKLDFSNLDDDDGIR 304
+NN H S +LSV S + I S +N S P+ A+ P K S+ G R
Sbjct: 242 MNNGHRSRDLSVTASDERRHSTEILSSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGR 301
Query: 305 DESQAPVSH--SPPYKRVRA-LRLFDSPHTPKTLLEKCSTPTHHPPRT 439
Q P + +P A +RL + + KT K T H PP +
Sbjct: 302 TLEQRPTNEPATPTSSTTSASVRLHSNDNHVKT--PKHQTNGHAPPES 347
>AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquitin
E3 ligase Smurf1 protein.
Length = 1061
Score = 29.1 bits (62), Expect = 6.0
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Frame = +2
Query: 146 LNNKHNSSELSVETSCDMSDPFNIFS----DNLS---PIPASIVPRKLDFSNLDDDDGIR 304
+NN H S +LSV S + I S +N S P+ A+ P K S+ G R
Sbjct: 242 MNNGHRSRDLSVTASDERRHSTEILSSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGR 301
Query: 305 DESQAPVSH--SPPYKRVRA-LRLFDSPHTPKTLLEKCSTPTHHPPRT 439
Q P + +P A +RL + + KT K T H PP +
Sbjct: 302 TLEQRPTNEPATPTSSTTSASVRLHSNDNHVKT--PKHQTNGHAPPES 347
>AF416571-1|AAL09691.1| 1061|Drosophila melanogaster
ubiquitin-protein ligase protein.
Length = 1061
Score = 29.1 bits (62), Expect = 6.0
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Frame = +2
Query: 146 LNNKHNSSELSVETSCDMSDPFNIFS----DNLS---PIPASIVPRKLDFSNLDDDDGIR 304
+NN H S +LSV S + I S +N S P+ A+ P K S+ G R
Sbjct: 242 MNNGHRSRDLSVTASDERRHSTEILSSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGR 301
Query: 305 DESQAPVSH--SPPYKRVRA-LRLFDSPHTPKTLLEKCSTPTHHPPRT 439
Q P + +P A +RL + + KT K T H PP +
Sbjct: 302 TLEQRPTNEPATPTSSTTSASVRLHSNDNHVKT--PKHQTNGHAPPES 347
>AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin
ligase protein.
Length = 1061
Score = 29.1 bits (62), Expect = 6.0
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Frame = +2
Query: 146 LNNKHNSSELSVETSCDMSDPFNIFS----DNLS---PIPASIVPRKLDFSNLDDDDGIR 304
+NN H S +LSV S + I S +N S P+ A+ P K S+ G R
Sbjct: 242 MNNGHRSRDLSVTASDERRHSTEILSSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGR 301
Query: 305 DESQAPVSH--SPPYKRVRA-LRLFDSPHTPKTLLEKCSTPTHHPPRT 439
Q P + +P A +RL + + KT K T H PP +
Sbjct: 302 TLEQRPTNEPATPTSSTTSASVRLHSNDNHVKT--PKHQTNGHAPPES 347
>AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA
protein.
Length = 1061
Score = 29.1 bits (62), Expect = 6.0
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Frame = +2
Query: 146 LNNKHNSSELSVETSCDMSDPFNIFS----DNLS---PIPASIVPRKLDFSNLDDDDGIR 304
+NN H S +LSV S + I S +N S P+ A+ P K S+ G R
Sbjct: 242 MNNGHRSRDLSVTASDERRHSTEILSSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGR 301
Query: 305 DESQAPVSH--SPPYKRVRA-LRLFDSPHTPKTLLEKCSTPTHHPPRT 439
Q P + +P A +RL + + KT K T H PP +
Sbjct: 302 TLEQRPTNEPATPTSSTTSASVRLHSNDNHVKT--PKHQTNGHAPPES 347
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,366,204
Number of Sequences: 53049
Number of extensions: 716899
Number of successful extensions: 2352
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -