Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o10
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 33 0.14
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 33 0.14
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z68227-16|CAA92506.2| 378|Caenorhabditis elegans Hypothetical p... 30 1.8
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.4
AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical... 28 5.4
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 28 7.2
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 28 7.2
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical... 27 9.5
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 27 9.5
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 27 9.5
AF045635-1|AAU87830.1| 480|Caenorhabditis elegans Nuclear hormo... 27 9.5
AF039047-11|AAB94230.1| 354|Caenorhabditis elegans Prion-like-(... 27 9.5
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 346 ESQSLEVVRQSSHSKDALREVFDTDSSSAQDETVPAQDQRANRNAIRLEPPP 501
+S S+ + ++S + D +SSS E +P +++R R A+ L PPP
Sbjct: 70 DSPSVNSLTRNSSLTMLAKAALDYESSSCALEYIPKEERRPPRRALALSPPP 121
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 346 ESQSLEVVRQSSHSKDALREVFDTDSSSAQDETVPAQDQRANRNAIRLEPPP 501
+S S+ + ++S + D +SSS E +P +++R R A+ L PPP
Sbjct: 70 DSPSVNSLTRNSSLTMLAKAALDYESSSCALEYIPKEERRPPRRALALSPPP 121
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 218 FSDNLSPIPASIVPRKLDFSNLDDDDGIRDESQAPVSHSP 337
F+ N+SPI P +L NL D + RD S +PV+ SP
Sbjct: 1859 FNCNISPIKGYSPPAELRPLNLMDSETERDSSASPVTSSP 1898
>Z68227-16|CAA92506.2| 378|Caenorhabditis elegans Hypothetical
protein F49C12.1 protein.
Length = 378
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 YRMKTGLNNKHN-SSELSVETSCDMSDPFNIFSDNLSPIPASIVPRKLDFSNLD 286
+R KT L+N + S E+ ET + FN F+DNL +P + D SN+D
Sbjct: 33 FRRKTYLHNLLSYSKEVPFET-VNAGVEFNSFADNLKKMPEAPYVIMFDSSNID 85
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 296 GIRDESQAPVSHSPPYKRVRALRLFDSPHTPKTLLEKCSTPTHHPPRT 439
G+R + P H P ++ R++RL +P L TP H P RT
Sbjct: 53 GVRLAPKKPHQHRPR-RQFRSVRLPRTPSRNSPLTPPTKTPPHTPTRT 99
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 415 TDSSSAQDETVPAQDQRANRNAIRLEPPPPSA 510
T S Q +T P DQ N + PPP SA
Sbjct: 295 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 326
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 415 TDSSSAQDETVPAQDQRANRNAIRLEPPPPSA 510
T S Q +T P DQ N + PPP SA
Sbjct: 363 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 394
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 415 TDSSSAQDETVPAQDQRANRNAIRLEPPPPSA 510
T S Q +T P DQ N + PPP SA
Sbjct: 295 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 326
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 415 TDSSSAQDETVPAQDQRANRNAIRLEPPPPSA 510
T S Q +T P DQ N + PPP SA
Sbjct: 363 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSA 394
>AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical
protein Y39G10AR.15 protein.
Length = 704
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 412 DTDSSSAQDETVPAQDQRANRNAIRLEPPPPSAIW*RRQRARQSTPGRTGRVPADRK 582
D +S + + P Q ++ R R +PPPP+ ++ + + ++GR+ DRK
Sbjct: 119 DQNSKLERPKLEPEQPEKLERPLARPQPPPPAIPVVKKISKQNTKDKKSGRI-TDRK 174
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 448 PAQDQRANRNAIRLEPPPPSAIW*RRQRARQSTPGRT 558
P +D+ ++RN R PPP + R+R+ PGR+
Sbjct: 137 PREDRFSDRNPPREHSPPPPQRFPARERSPAYIPGRS 173
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 203 PTCHKMSRQTIQTNCAYCLVLFSFCTTQSCPFPHI 99
PTC K ++ T+ C L F T C FP +
Sbjct: 37 PTCEKAYMTSVNTHIGVCWWLICFFGTVLCCFPFL 71
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -1
Query: 341 KVGCEIQAPGIHL*CRHHRPDY*NLAS*AQWTLVSGSNYQKIC*KDPTCHKMSRQTIQTN 162
K C+I PG C H +PD + + ++ C +D CH +S++ +T
Sbjct: 1262 KAECQIACPGYRGYCPHGKPDVTDHS-------LTTCGIDTGCPRDHVCH-VSKRGSKTV 1313
Query: 161 CAYCLVLFSFCTTQSCPFP 105
C C SFC ++ P P
Sbjct: 1314 C--CPDPASFCLVRADPGP 1330
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -1
Query: 341 KVGCEIQAPGIHL*CRHHRPDY*NLAS*AQWTLVSGSNYQKIC*KDPTCHKMSRQTIQTN 162
K C+I PG C H +PD + + ++ C +D CH +S++ +T
Sbjct: 1680 KAECQIACPGYRGYCPHGKPDVTDHS-------LTTCGIDTGCPRDHVCH-VSKRGSKTV 1731
Query: 161 CAYCLVLFSFCTTQSCPFP 105
C C SFC ++ P P
Sbjct: 1732 C--CPDPASFCLVRADPGP 1748
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 433 QDETVPAQDQRANRNAIRLEPPPPSAIW*RRQRARQSTPGRTGR 564
QD VP + + PPPP + RAR TPG R
Sbjct: 236 QDHVVPEPPREKSVPPPPPPPPPPKPVSREPSRARSMTPGTRER 279
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 433 QDETVPAQDQRANRNAIRLEPPPPSAIW*RRQRARQSTPGRTGR 564
QD VP + + PPPP + RAR TPG R
Sbjct: 251 QDHVVPEPPREKSVPPPPPPPPPPKPVSREPSRARSMTPGTRER 294
>AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical
protein Y39B6A.16 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.5
Identities = 25/97 (25%), Positives = 39/97 (40%)
Frame = +2
Query: 155 KHNSSELSVETSCDMSDPFNIFSDNLSPIPASIVPRKLDFSNLDDDDGIRDESQAPVSHS 334
+ NS +++ S + +FSD++ P I R F+ E++AP S
Sbjct: 164 RSNSLKVASSRSLETPSMMRVFSDSMYETPVQIQRR---FTKAQAK--AEAEAEAPAK-S 217
Query: 335 PPYKRVRALRLFDSPHTPKTLLEKCSTPTHHPPRTRL 445
P K + P E TP HHPP+T +
Sbjct: 218 PGSKAQTTKCTSNYQSHPPASFE---TPIHHPPKTSM 251
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 433 QDETVPAQDQRANRNAIRLEPPPPSAIW*RRQRARQSTPGRTGR 564
QD VP + + PPPP + RAR TPG R
Sbjct: 236 QDHVVPEPPREKSVPPPPPPPPPPKPVSREPSRARSMTPGTRER 279
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 433 QDETVPAQDQRANRNAIRLEPPPPSAIW*RRQRARQSTPGRTGR 564
QD VP + + PPPP + RAR TPG R
Sbjct: 251 QDHVVPEPPREKSVPPPPPPPPPPKPVSREPSRARSMTPGTRER 294
>AF045635-1|AAU87830.1| 480|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 76 protein.
Length = 480
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 409 FDTDSSSAQDETVPAQDQRANRNAIRLEPPPPSAI 513
F+T SSS +VP ++ ++P PPSAI
Sbjct: 26 FETPSSSTTTPSVPPSFPHSSNPNAYMKPSPPSAI 60
>AF039047-11|AAB94230.1| 354|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 51
protein.
Length = 354
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 314 QAPVSHSPPYKRVRALRLFDSPHTPKTLLEKCST--PTHHPPRTRLFPPK 457
Q PV+ P VRAL + H + T PT HP + R+F P+
Sbjct: 83 QRPVAQQP----VRALSALHAAHIGDAPIRMAYTGQPTQHPSQVRMFNPQ 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,294,040
Number of Sequences: 27780
Number of extensions: 354464
Number of successful extensions: 1116
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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