Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2o08
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   5.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 169 NYFLGNHYRRSLTDRWSRALYQRDMRLTGNPYEVN 273
           NY+     RR   +R+ + L +  +  +G   E+N
Sbjct: 400 NYYRHKQKRRDERERYFKGLDEEKLPESGENIEIN 434


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 36  LIIYVSFVVELFILLEKNVV*NTTNSCNYYSFNWIAGLGTVVVS 167
           ++ Y+S  V L      +   N   +   Y+FN  A L  +VVS
Sbjct: 326 ILFYLSVFVILVYYASLDETPNPVTNGKLYNFNTFAKLLILVVS 369


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 165 TPPQSPTRQ 139
           TPPQSP +Q
Sbjct: 34  TPPQSPNQQ 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,642
Number of Sequences: 336
Number of extensions: 1570
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)