Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o07
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001256-1|AAN71012.1| 383|Drosophila melanogaster AT01668p pro... 59 7e-09
AE014297-364|AAN14325.1| 383|Drosophila melanogaster CG10999-PB... 59 7e-09
AE014297-363|AAF51947.1| 383|Drosophila melanogaster CG10999-PA... 59 7e-09
AY094720-1|AAM11073.1| 367|Drosophila melanogaster GH18838p pro... 52 8e-07
AY119181-1|AAM51041.1| 503|Drosophila melanogaster SD02285p pro... 36 0.075
AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC... 35 0.099
AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB... 35 0.099
AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG channel-... 35 0.099
BT004902-1|AAO47880.1| 746|Drosophila melanogaster LD08432p pro... 34 0.17
AE014297-2133|AAF55262.2| 746|Drosophila melanogaster CG10278-P... 34 0.17
AB124838-1|BAD00020.1| 746|Drosophila melanogaster transcriptio... 34 0.17
AB054996-1|BAB21551.1| 571|Drosophila melanogaster dGATAe protein. 34 0.17
BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p pro... 34 0.23
AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB... 34 0.23
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA... 34 0.23
AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional s... 32 0.92
AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-P... 31 1.6
AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-P... 31 1.6
BT016119-1|AAV37004.1| 1234|Drosophila melanogaster LD04582p pro... 31 2.1
AY122074-1|AAM52586.1| 994|Drosophila melanogaster AT16994p pro... 31 2.1
AL133503-5|CAB72240.1| 1234|Drosophila melanogaster EG:BACH48C10... 31 2.1
AE014298-392|AAN09075.1| 1234|Drosophila melanogaster CG2841-PC,... 31 2.1
AE014298-391|AAN09074.1| 1234|Drosophila melanogaster CG2841-PB,... 31 2.1
AE014298-390|AAF45776.2| 1234|Drosophila melanogaster CG2841-PA,... 31 2.1
AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,... 31 2.1
AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,... 31 2.1
AE013599-641|AAF59100.3| 994|Drosophila melanogaster CG11641-PA... 31 2.1
AY113237-1|AAM29242.1| 363|Drosophila melanogaster AT11514p pro... 30 2.8
AE014134-1107|AAF52397.1| 363|Drosophila melanogaster CG9550-PA... 30 2.8
AY118944-1|AAM50804.1| 941|Drosophila melanogaster LD29915p pro... 30 3.7
AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine ... 30 3.7
AE014296-79|AAN11436.1| 925|Drosophila melanogaster CG1225-PC, ... 30 3.7
AE014296-76|AAF47374.1| 1011|Drosophila melanogaster CG1225-PA, ... 30 3.7
AE013599-2495|AAS64821.1| 1630|Drosophila melanogaster CG33130-P... 30 3.7
BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p pro... 29 4.9
AE014298-2865|AAN09499.1| 163|Drosophila melanogaster CG32534-P... 29 4.9
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 29 4.9
AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC... 29 4.9
AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB... 29 4.9
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ... 29 4.9
AY094737-1|AAM11090.1| 828|Drosophila melanogaster GH28553p pro... 29 6.5
AE014297-3729|AAF56407.3| 828|Drosophila melanogaster CG11848-P... 29 6.5
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA... 29 6.5
U65105-1|AAC47267.1| 298|Drosophila melanogaster Dreg-5 protein. 29 8.6
BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p pro... 29 8.6
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA... 29 8.6
AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA... 29 8.6
>BT001256-1|AAN71012.1| 383|Drosophila melanogaster AT01668p
protein.
Length = 383
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = +2
Query: 173 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQP 352
SRL QMQ RFQQ+ QE+E++ R L + S N + A S T +
Sbjct: 12 SRLAQMQMRFQQRTQQEQEVR---------RRELMSTKSSAENLATGAPSAATTRLIGN- 61
Query: 353 GKVRQMFEERRTKAGIDKSYPLQPI 427
GKVRQMF+ERR AGID+S PL+PI
Sbjct: 62 GKVRQMFDERRRGAGIDRSNPLKPI 86
>AE014297-364|AAN14325.1| 383|Drosophila melanogaster CG10999-PB,
isoform B protein.
Length = 383
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = +2
Query: 173 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQP 352
SRL QMQ RFQQ+ QE+E++ R L + S N + A S T +
Sbjct: 12 SRLAQMQMRFQQRTQQEQEVR---------RRELMSTKSSAENLATGAPSAATTRLIGN- 61
Query: 353 GKVRQMFEERRTKAGIDKSYPLQPI 427
GKVRQMF+ERR AGID+S PL+PI
Sbjct: 62 GKVRQMFDERRRGAGIDRSNPLKPI 86
>AE014297-363|AAF51947.1| 383|Drosophila melanogaster CG10999-PA,
isoform A protein.
Length = 383
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = +2
Query: 173 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQP 352
SRL QMQ RFQQ+ QE+E++ R L + S N + A S T +
Sbjct: 12 SRLAQMQMRFQQRTQQEQEVR---------RRELMSTKSSAENLATGAPSAATTRLIGN- 61
Query: 353 GKVRQMFEERRTKAGIDKSYPLQPI 427
GKVRQMF+ERR AGID+S PL+PI
Sbjct: 62 GKVRQMFDERRRGAGIDRSNPLKPI 86
>AY094720-1|AAM11073.1| 367|Drosophila melanogaster GH18838p
protein.
Length = 367
Score = 52.0 bits (119), Expect = 8e-07
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = +2
Query: 188 MQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVRQ 367
MQ RFQQ+ QE+E++ R L + S N + A S T + GKVRQ
Sbjct: 1 MQMRFQQRTQQEQEVR---------RRELMSTKSSAENLATGAPSAATTRLIGN-GKVRQ 50
Query: 368 MFEERRTKAGIDKSYPLQPI 427
MF+ERR AGID+S PL+PI
Sbjct: 51 MFDERRRGAGIDRSNPLKPI 70
>AY119181-1|AAM51041.1| 503|Drosophila melanogaster SD02285p
protein.
Length = 503
Score = 35.5 bits (78), Expect = 0.075
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +2
Query: 179 LLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGK 358
LLQ Q + QQ+QLQ+++ + + Q + +++Q + + QP P P K
Sbjct: 112 LLQQQQQQQQQQLQQQQQQQQQQLQQQLQQQQLQLQQQQQQQMVPPAPPQPAPPPPPKPK 171
Query: 359 VRQMFEERRTKAGIDKSY 412
+ F E G+ SY
Sbjct: 172 IVNTFTEIPGTTGVGSSY 189
>AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC,
isoform C protein.
Length = 1453
Score = 35.1 bits (77), Expect = 0.099
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +2
Query: 167 GGSRLLQMQARFQQKQLQERELKIASLYEA-----QQARALDRVRQSPSNGVSTASSQQP 331
G RL++++ +K + + K A+ Y A Q+ +V QS S+ ++AS +
Sbjct: 555 GRKRLMEVRC-VNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSE-NSASKKIV 612
Query: 332 TPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKV 481
+ H R + ++ RT D+S +QP+HNT K L ++V
Sbjct: 613 DKLKHDVKGFRNVLKKSRTSRKSDESLEMQPLHNTSPRGSKILLKRMSRV 662
>AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB,
isoform B protein.
Length = 1853
Score = 35.1 bits (77), Expect = 0.099
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +2
Query: 167 GGSRLLQMQARFQQKQLQERELKIASLYEA-----QQARALDRVRQSPSNGVSTASSQQP 331
G RL++++ +K + + K A+ Y A Q+ +V QS S+ ++AS +
Sbjct: 555 GRKRLMEVRC-VNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSE-NSASKKIV 612
Query: 332 TPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKV 481
+ H R + ++ RT D+S +QP+HNT K L ++V
Sbjct: 613 DKLKHDVKGFRNVLKKSRTSRKSDESLEMQPLHNTSPRGSKILLKRMSRV 662
>AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG
channel-like protein.
Length = 1463
Score = 35.1 bits (77), Expect = 0.099
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +2
Query: 167 GGSRLLQMQARFQQKQLQERELKIASLYEA-----QQARALDRVRQSPSNGVSTASSQQP 331
G RL++++ +K + + K A+ Y A Q+ +V QS S+ ++AS +
Sbjct: 555 GRKRLMEVRC-VNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSE-NSASKKIV 612
Query: 332 TPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKV 481
+ H R + ++ RT D+S +QP+HNT K L ++V
Sbjct: 613 DKLKHDVKGFRNVLKKSRTSRKSDESLEMQPLHNTSPRGSKILLKRMSRV 662
>BT004902-1|AAO47880.1| 746|Drosophila melanogaster LD08432p
protein.
Length = 746
Score = 34.3 bits (75), Expect = 0.17
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 185 QMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVR 364
Q Q + QQ+QLQ+++ + + QQ + LD+++ SNG + Q + Q + +
Sbjct: 27 QQQQQQQQQQLQQQQHQALT---KQQLQLLDKIKLESSNGADQLAQQTANNLDEQQEQQQ 83
Query: 365 QMFEERRTKAGI 400
Q ++ T G+
Sbjct: 84 QHQQQAATSVGV 95
>AE014297-2133|AAF55262.2| 746|Drosophila melanogaster CG10278-PA
protein.
Length = 746
Score = 34.3 bits (75), Expect = 0.17
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 185 QMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVR 364
Q Q + QQ+QLQ+++ + + QQ + LD+++ SNG + Q + Q + +
Sbjct: 27 QQQQQQQQQQLQQQQHQALT---KQQLQLLDKIKLESSNGADQLAQQTANNLDEQQEQQQ 83
Query: 365 QMFEERRTKAGI 400
Q ++ T G+
Sbjct: 84 QHQQQAATSVGV 95
>AB124838-1|BAD00020.1| 746|Drosophila melanogaster transcription
factor dGATAe protein.
Length = 746
Score = 34.3 bits (75), Expect = 0.17
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 185 QMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVR 364
Q Q + QQ+QLQ+++ + + QQ + LD+++ SNG + Q + Q + +
Sbjct: 27 QQQQQQQQQQLQQQQHQALT---KQQLQLLDKIKLESSNGADQLAQQTANNLDEQQEQQQ 83
Query: 365 QMFEERRTKAGI 400
Q ++ T G+
Sbjct: 84 QHQQQAATSVGV 95
>AB054996-1|BAB21551.1| 571|Drosophila melanogaster dGATAe protein.
Length = 571
Score = 34.3 bits (75), Expect = 0.17
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 185 QMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVR 364
Q Q + QQ+QLQ+++ + + QQ + LD+++ SNG + Q + Q + +
Sbjct: 27 QQQQQQQQQQLQQQQHQALT---KQQLQLLDKIKLESSNGADQLAQQTANNLDEQQEQQQ 83
Query: 365 QMFEERRTKAGI 400
Q ++ T G+
Sbjct: 84 QHQQQAATSVGV 95
>BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p protein.
Length = 1559
Score = 33.9 bits (74), Expect = 0.23
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTP--VPHQPGKVRQMFEERRTKAGIDKSYP---- 415
AQQ + L + QS ++ V + QQP P + HQ G + + R D P
Sbjct: 1406 AQQLQMLQQHHQSTTSPVPVQNPQQPAPEQLIHQNGNGQYVLVHRANVGAADNQAPRASS 1465
Query: 416 LQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVN 595
P+H + T+ N ++ R R TT S +V I ++
Sbjct: 1466 APPMHQNQFV---TVQNPLHSINGIPMGGR----GRPASVDTTAGSGNV-----IAPPIS 1513
Query: 596 GSGDLNHNHEDDISAVKHSLPQSNGEIG 679
+ L+H+H + +H PQ G +G
Sbjct: 1514 ATDALHHHHHEMQQQQQHQQPQPLGNVG 1541
>AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB,
isoform B protein.
Length = 1560
Score = 33.9 bits (74), Expect = 0.23
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTP--VPHQPGKVRQMFEERRTKAGIDKSYP---- 415
AQQ + L + QS ++ V + QQP P + HQ G + + R D P
Sbjct: 1407 AQQLQMLQQHHQSTTSPVPVQNPQQPAPEQLIHQNGNGQYVLVHRANVGAADNQAPRASS 1466
Query: 416 LQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVN 595
P+H + T+ N ++ R R TT S +V I ++
Sbjct: 1467 APPMHQNQFV---TVQNPLHSINGIPMGGR----GRPASVDTTAGSGNV-----IAPPIS 1514
Query: 596 GSGDLNHNHEDDISAVKHSLPQSNGEIG 679
+ L+H+H + +H PQ G +G
Sbjct: 1515 ATDALHHHHHEMQQQQQHQQPQPLGNVG 1542
>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
isoform A protein.
Length = 1669
Score = 33.9 bits (74), Expect = 0.23
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTP--VPHQPGKVRQMFEERRTKAGIDKSYP---- 415
AQQ + L + QS ++ V + QQP P + HQ G + + R D P
Sbjct: 1407 AQQLQMLQQHHQSTTSPVPVQNPQQPAPEQLIHQNGNGQYVLVHRANVGAADNQAPRASS 1466
Query: 416 LQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVN 595
P+H + T+ N ++ R R TT S +V I ++
Sbjct: 1467 APPMHQNQFV---TVQNPLHSINGIPMGGR----GRPASVDTTAGSGNV-----IAPPIS 1514
Query: 596 GSGDLNHNHEDDISAVKHSLPQSNGEIG 679
+ L+H+H + +H PQ G +G
Sbjct: 1515 ATDALHHHHHEMQQQQQHQQPQPLGNVG 1542
>AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional sex
combs protein.
Length = 1668
Score = 31.9 bits (69), Expect = 0.92
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTP--VPHQPGKVRQMFEERRTKAGIDKSYP---- 415
AQQ + L + QS ++ V + QQP P + HQ G + + R D P
Sbjct: 1407 AQQLQMLQQHHQSTTSPVPVQNPQQPAPEQLIHQNGNGQYVLVHRANVGAADNQAPRASS 1466
Query: 416 LQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVN 595
P+H + T+ N ++ R R TT S +V I ++
Sbjct: 1467 APPMHQNQFV---TVQNPLHSINGIPMGGR----GRPASVDTTAGSGNV-----IAPPIS 1514
Query: 596 GSGDLNHNHEDDISAVKHSLPQSNGEIG 679
+ L+H+HE +H PQ G +G
Sbjct: 1515 ATDALHHHHEMQ-QQQQHQQPQPLGNVG 1541
>AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-PA
protein.
Length = 2977
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 203 QQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVRQMF 373
Q+ Q Q+++ + Y++ D SPS ++ A+ + PTP P Q + Q F
Sbjct: 245 QKGQQQQQQHQQFQHYQSSSPLIADSPIPSPSGAIAAAAIKPPTPQPQQMQMLPQQF 301
>AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-PA
protein.
Length = 2072
Score = 31.1 bits (67), Expect = 1.6
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +2
Query: 179 LLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQP--TPV-PHQ 349
L Q QA+ Q+ +L ++ ++ A A + S GVS S Q TP P
Sbjct: 620 LFQEQAKKQRPKLANKQ---STATPASIANDVAEAAASGCPGVSILSRGQSMVTPAGPST 676
Query: 350 PGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQ 529
P ++ +++ TK+ + + T NRK+ +++TTS+ S
Sbjct: 677 PPPPSRVAQQKSTKSIVTTAVAASVKPTTGSPNRKS---SIQAATSTTTSSGASSSTAST 733
Query: 530 KTHTTVSSHSVKKQQKIDNLVNG 598
TH + S KQQ ++NL +G
Sbjct: 734 PTHAS----SKLKQQPVNNLQHG 752
>BT016119-1|AAV37004.1| 1234|Drosophila melanogaster LD04582p protein.
Length = 1234
Score = 30.7 bits (66), Expect = 2.1
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTPVPHQ--PG-------KVRQMFEERRTKAGIDK 406
A++ ++D V+ S+ S AS Q PTPVP + PG R + E + + K
Sbjct: 710 AKEQSSVDGVKDISSSR-SEASQQSPTPVPKKSNPGVEKPTSPTFRAVQEPYPSSPALQK 768
Query: 407 SYPLQPIHNTERTNRKTLPNGYAKVSNSTTS---TRVIVEKRS 526
S P T R +LP V S ++V+K S
Sbjct: 769 SSPAVQEQRTSPVERPSLPPAVKSVEEQAVSLHQKEIVVQKES 811
>AY122074-1|AAM52586.1| 994|Drosophila melanogaster AT16994p
protein.
Length = 994
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 203 QQKQLQERELKIASLYEAQQARALDRVRQSPSN 301
QQ+Q Q+R+L SL Q A AL ++ Q+P+N
Sbjct: 333 QQQQQQQRDLLPPSLAALQHATALPQLAQTPTN 365
>AL133503-5|CAB72240.1| 1234|Drosophila melanogaster EG:BACH48C10.5
protein.
Length = 1234
Score = 30.7 bits (66), Expect = 2.1
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTPVPHQ--PG-------KVRQMFEERRTKAGIDK 406
A++ ++D V+ S+ S AS Q PTPVP + PG R + E + + K
Sbjct: 710 AKEQSSVDGVKDISSSR-SEASQQSPTPVPKKSNPGVEKPTSPTFRAVQEPYPSSPALQK 768
Query: 407 SYPLQPIHNTERTNRKTLPNGYAKVSNSTTS---TRVIVEKRS 526
S P T R +LP V S ++V+K S
Sbjct: 769 SSPAVQEQRTSPVERPSLPPAVKSVEEQAVSLHQKEIVVQKES 811
>AE014298-392|AAN09075.1| 1234|Drosophila melanogaster CG2841-PC,
isoform C protein.
Length = 1234
Score = 30.7 bits (66), Expect = 2.1
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTPVPHQ--PG-------KVRQMFEERRTKAGIDK 406
A++ ++D V+ S+ S AS Q PTPVP + PG R + E + + K
Sbjct: 710 AKEQSSVDGVKDISSSR-SEASQQSPTPVPKKSNPGVEKPTSPTFRAVQEPYPSSPALQK 768
Query: 407 SYPLQPIHNTERTNRKTLPNGYAKVSNSTTS---TRVIVEKRS 526
S P T R +LP V S ++V+K S
Sbjct: 769 SSPAVQEQRTSPVERPSLPPAVKSVEEQAVSLHQKEIVVQKES 811
>AE014298-391|AAN09074.1| 1234|Drosophila melanogaster CG2841-PB,
isoform B protein.
Length = 1234
Score = 30.7 bits (66), Expect = 2.1
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTPVPHQ--PG-------KVRQMFEERRTKAGIDK 406
A++ ++D V+ S+ S AS Q PTPVP + PG R + E + + K
Sbjct: 710 AKEQSSVDGVKDISSSR-SEASQQSPTPVPKKSNPGVEKPTSPTFRAVQEPYPSSPALQK 768
Query: 407 SYPLQPIHNTERTNRKTLPNGYAKVSNSTTS---TRVIVEKRS 526
S P T R +LP V S ++V+K S
Sbjct: 769 SSPAVQEQRTSPVERPSLPPAVKSVEEQAVSLHQKEIVVQKES 811
>AE014298-390|AAF45776.2| 1234|Drosophila melanogaster CG2841-PA,
isoform A protein.
Length = 1234
Score = 30.7 bits (66), Expect = 2.1
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTPVPHQ--PG-------KVRQMFEERRTKAGIDK 406
A++ ++D V+ S+ S AS Q PTPVP + PG R + E + + K
Sbjct: 710 AKEQSSVDGVKDISSSR-SEASQQSPTPVPKKSNPGVEKPTSPTFRAVQEPYPSSPALQK 768
Query: 407 SYPLQPIHNTERTNRKTLPNGYAKVSNSTTS---TRVIVEKRS 526
S P T R +LP V S ++V+K S
Sbjct: 769 SSPAVQEQRTSPVERPSLPPAVKSVEEQAVSLHQKEIVVQKES 811
>AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,
isoform C protein.
Length = 1201
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +2
Query: 179 LLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGK 358
LLQ Q + QQ+QLQ+++ + + QQ +++ V A Q P P P K
Sbjct: 814 LLQQQQQQQQQQLQQQQQQ--QQQQLQQQLQQQQLQLQQQQMVPPAPPQ-PAPPPPPKPK 870
Query: 359 VRQMFEERRTKAGIDKSY 412
+ F E G+ SY
Sbjct: 871 IVNTFTEIPGTTGVGSSY 888
>AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,
isoform D protein.
Length = 1404
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +2
Query: 179 LLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGK 358
LLQ Q + QQ+QLQ+++ + + QQ +++ V A Q P P P K
Sbjct: 814 LLQQQQQQQQQQLQQQQQQ--QQQQLQQQLQQQQLQLQQQQMVPPAPPQ-PAPPPPPKPK 870
Query: 359 VRQMFEERRTKAGIDKSY 412
+ F E G+ SY
Sbjct: 871 IVNTFTEIPGTTGVGSSY 888
>AE013599-641|AAF59100.3| 994|Drosophila melanogaster CG11641-PA
protein.
Length = 994
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 203 QQKQLQERELKIASLYEAQQARALDRVRQSPSN 301
QQ+Q Q+R+L SL Q A AL ++ Q+P+N
Sbjct: 333 QQQQQQQRDLLPPSLAALQHATALPQLAQTPTN 365
>AY113237-1|AAM29242.1| 363|Drosophila melanogaster AT11514p
protein.
Length = 363
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = -2
Query: 619 IVVEITGAVHQIVYFLLFLNAMRADCCMCLLRSLLDYDPRAGGGIRNLRVSVR*CLPVRS 440
+ V G V F+ FL M + L RSL+ Y G IRNL + P+RS
Sbjct: 10 LTVACVGVYTTYVLFIFFLLPMLMPDPVTLQRSLVSYSTSHLGDIRNLTLDAG-GQPIRS 68
Query: 439 FGVVYR 422
V +R
Sbjct: 69 MLVTFR 74
>AE014134-1107|AAF52397.1| 363|Drosophila melanogaster CG9550-PA
protein.
Length = 363
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = -2
Query: 619 IVVEITGAVHQIVYFLLFLNAMRADCCMCLLRSLLDYDPRAGGGIRNLRVSVR*CLPVRS 440
+ V G V F+ FL M + L RSL+ Y G IRNL + P+RS
Sbjct: 10 LTVACVGVYTTYVLFIFFLLPMLMPDPVTLQRSLVSYSTSHLGDIRNLTLDAG-GQPIRS 68
Query: 439 FGVVYR 422
V +R
Sbjct: 69 MLVTFR 74
>AY118944-1|AAM50804.1| 941|Drosophila melanogaster LD29915p
protein.
Length = 941
Score = 29.9 bits (64), Expect = 3.7
Identities = 33/145 (22%), Positives = 60/145 (41%)
Frame = +2
Query: 167 GGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPH 346
GG +LQ R + +L I+ L A + + SP+ ++ + T
Sbjct: 140 GGLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTTAS 199
Query: 347 QPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRS 526
PG E T +G + PL I + + RKT N K ++ + ++ +E+
Sbjct: 200 DPGS-----EAGDTSSGKYRFGPL--IWRSSKERRKTKYNRRDKCNSGDSGIQIELEQDE 252
Query: 527 QKTHTTVSSHSVKKQQKIDNLVNGS 601
Q + T++ S + + + L NGS
Sbjct: 253 QYSRATMAV-SRQDEPRAFALTNGS 276
>AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine
nucleotide exchangefactor 3 protein.
Length = 1011
Score = 29.9 bits (64), Expect = 3.7
Identities = 33/145 (22%), Positives = 60/145 (41%)
Frame = +2
Query: 167 GGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPH 346
GG +LQ R + +L I+ L A + + SP+ ++ + T
Sbjct: 140 GGLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTTPTASIAPMITTTTAS 199
Query: 347 QPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRS 526
PG E T +G + PL I + + RKT N K ++ + ++ +E+
Sbjct: 200 DPGS-----EAGDTSSGKYRFGPL--IWRSSKERRKTKYNRRDKCNSGDSGIQIELEQDE 252
Query: 527 QKTHTTVSSHSVKKQQKIDNLVNGS 601
Q + T++ S + + + L NGS
Sbjct: 253 QYSRATMAV-SRQDEPRAFALTNGS 276
>AE014296-79|AAN11436.1| 925|Drosophila melanogaster CG1225-PC,
isoform C protein.
Length = 925
Score = 29.9 bits (64), Expect = 3.7
Identities = 33/145 (22%), Positives = 60/145 (41%)
Frame = +2
Query: 167 GGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPH 346
GG +LQ R + +L I+ L A + + SP+ ++ + T
Sbjct: 54 GGLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTTAS 113
Query: 347 QPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRS 526
PG E T +G + PL I + + RKT N K ++ + ++ +E+
Sbjct: 114 DPGS-----EAGDTSSGKYRFGPL--IWRSSKERRKTKYNRRDKCNSGDSGIQIELEQDE 166
Query: 527 QKTHTTVSSHSVKKQQKIDNLVNGS 601
Q + T++ S + + + L NGS
Sbjct: 167 QYSRATMAV-SRQDEPRAFALTNGS 190
>AE014296-76|AAF47374.1| 1011|Drosophila melanogaster CG1225-PA,
isoform A protein.
Length = 1011
Score = 29.9 bits (64), Expect = 3.7
Identities = 33/145 (22%), Positives = 60/145 (41%)
Frame = +2
Query: 167 GGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTPVPH 346
GG +LQ R + +L I+ L A + + SP+ ++ + T
Sbjct: 140 GGLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTTAS 199
Query: 347 QPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRS 526
PG E T +G + PL I + + RKT N K ++ + ++ +E+
Sbjct: 200 DPGS-----EAGDTSSGKYRFGPL--IWRSSKERRKTKYNRRDKCNSGDSGIQIELEQDE 252
Query: 527 QKTHTTVSSHSVKKQQKIDNLVNGS 601
Q + T++ S + + + L NGS
Sbjct: 253 QYSRATMAV-SRQDEPRAFALTNGS 276
>AE013599-2495|AAS64821.1| 1630|Drosophila melanogaster CG33130-PC,
isoform C protein.
Length = 1630
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 203 QQKQLQERELKIASLYEAQQ-ARALDRVRQSPSNGVSTASSQQPTPVPHQ 349
QQ Q+Q + L+ L +AQQ A L++ +P VS SS+ P+ P+Q
Sbjct: 694 QQSQMQAQHLQAQQLMQAQQIANMLNQAYNAP---VSAYSSRPPSRDPYQ 740
>BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p
protein.
Length = 1214
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 158 EKGGGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTP 337
+KGG Q + QQKQ Q+R+ + L + QQ + +++Q QQ
Sbjct: 8 KKGGQDSAAAPQPQQQQKQQQQRQQQPQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQS 67
Query: 338 VPHQP 352
QP
Sbjct: 68 SRQQP 72
>AE014298-2865|AAN09499.1| 163|Drosophila melanogaster CG32534-PA
protein.
Length = 163
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 479 VSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNHEDDISAVKHSLP 658
+ +TTST + T + ++++ N G G++N+N E++I AV S
Sbjct: 12 IDATTTSTNNSTTNSNTTTPANIIANTINSNHSSSNS-GGGGNINNNGEENIQAVGGSNT 70
Query: 659 QSN 667
SN
Sbjct: 71 ISN 73
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 185 QMQARFQQKQLQERELKIASLYEAQQARA-LDRVRQSPSNGVSTASSQQP------TPVP 343
Q ++R +QKQ Q+++ + + Q+ +A L++V+ P + S Q P P P
Sbjct: 991 QQRSRRKQKQQQQKQQQQKQQQKKQEQKAKLEKVKSPPEPPAAVESDQMPAKTEARAPAP 1050
Query: 344 HQPGKVRQMFEER 382
K R EE+
Sbjct: 1051 TVTAKSRSPAEEK 1063
>AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC,
isoform C protein.
Length = 1217
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 158 EKGGGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTP 337
+KGG Q + QQKQ Q+R+ + L + QQ + +++Q QQ
Sbjct: 11 KKGGQDSAAAPQPQQQQKQQQQRQQQPQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQS 70
Query: 338 VPHQP 352
QP
Sbjct: 71 SRQQP 75
>AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB,
isoform B protein.
Length = 1214
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 158 EKGGGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASSQQPTP 337
+KGG Q + QQKQ Q+R+ + L + QQ + +++Q QQ
Sbjct: 8 KKGGQDSAAAPQPQQQQKQQQQRQQQPQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQS 67
Query: 338 VPHQP 352
QP
Sbjct: 68 SRQQP 72
>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
protein.
Length = 1629
Score = 29.5 bits (63), Expect = 4.9
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Frame = +2
Query: 287 QSPSNGVSTASSQQPTPVPHQ---PGKVRQMFE------ERRTKAGIDKS--YPLQPIH- 430
Q P+ + ++Q+PTP P Q P V Q+ E +++ + + S Y QP++
Sbjct: 383 QMPTQKTTQKATQKPTPKPTQKAKPKPVPQLAESMKRPIQQKPQQDLQFSTGYGPQPVYA 442
Query: 431 NTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDL 610
+ ++ P + +S+ST++ R S T +++++H + I L N S
Sbjct: 443 EPPKQQQQQQPAEQSYISSSTSAKRPTTGHNSPTTVSSITTHVDSIESIILQLNNTSHGP 502
Query: 611 NHN 619
++N
Sbjct: 503 SYN 505
>AY094737-1|AAM11090.1| 828|Drosophila melanogaster GH28553p
protein.
Length = 828
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 515 EKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNHEDDISAVKHSLPQSNGEI 676
+ + + H H ++QQ+ N ++ L HNH+ H LPQ G +
Sbjct: 172 QHQQHQQHQQHQQHLHQQQQQQANFLHIQQSLQHNHQLSHPEPIHQLPQLQGTV 225
>AE014297-3729|AAF56407.3| 828|Drosophila melanogaster CG11848-PA
protein.
Length = 828
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 515 EKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNHEDDISAVKHSLPQSNGEI 676
+ + + H H ++QQ+ N ++ L HNH+ H LPQ G +
Sbjct: 172 QHQQHQQHQQHQQHLHQQQQQQANFLHIQQSLQHNHQLSHPEPIHQLPQLQGTV 225
>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
protein.
Length = 3146
Score = 29.1 bits (62), Expect = 6.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 182 LQMQARFQQKQLQERELKIASLYEAQQARALDRVR-QSPSNGVSTASSQQPTPVPHQP 352
+Q Q++ QQ+Q + QQ+ L + + Q P+ S Q+P PV HQP
Sbjct: 1641 VQQQSQPQQQQQNTHQQPHNQQAVQQQSNQLQQQQSQQPNYPQSPQRQQKPQPVQHQP 1698
>U65105-1|AAC47267.1| 298|Drosophila melanogaster Dreg-5 protein.
Length = 298
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/73 (21%), Positives = 31/73 (42%)
Frame = +2
Query: 497 STRVIVEKRSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNHEDDISAVKHSLPQSNGEI 676
++ +I+ R Q H +H ++ N + SG+ H + D+ PQS+ E+
Sbjct: 132 ASSLIILTRQQLPHGASHAHPIQSSGSATNPIFESGEQKHKYAMDMDKAYGYGPQSSSEL 191
Query: 677 GTDXR*TGQGGKQ 715
T + K+
Sbjct: 192 PVAAALTSEPSKR 204
>BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p protein.
Length = 2727
Score = 28.7 bits (61), Expect = 8.6
Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 3/160 (1%)
Frame = +2
Query: 215 LQERELKIASLYEAQQARALDRVRQSPSN-GVSTASSQQPTPVPHQPGKVRQMFEERRTK 391
L+ + + S ++ Q+ PS G +T +S++ + P P + E+ +
Sbjct: 1386 LKLADCEYLSAFDGNQSMGSASTAAKPSEKGGNTLTSRKSSSTPSLP----EATEKNQNP 1441
Query: 392 AGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQ 571
G ++T N +A S ++ + S + S Q
Sbjct: 1442 EGASNQTVSADNLAWKQTVETIAENVFASAKTQIISNQLAMNTSSSREARAKHKESGTNQ 1501
Query: 572 QKIDNLVNGSGDLNHN--HEDDISAVKHSLPQSNGEIGTD 685
DN ++G L+ H D+SA+ +S+P N +D
Sbjct: 1502 MHKDN-ISGPSPLSRELEHISDLSAINNSMPAINSSNVSD 1540
>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
protein.
Length = 1542
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 254 AQQARALDRVRQSPSNGVSTASSQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHN 433
A+ + + V S S+ ST+S+ T H PG + TKA + P Q +
Sbjct: 1436 AKPSTSASPVSSSSSSSTSTSSTTSTTSTTHPPGVTKSDVTLATTKAPAISTKPTQRKKS 1495
Query: 434 TERTNRKTL 460
T T+ L
Sbjct: 1496 TFETSLAAL 1504
>AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA
protein.
Length = 2727
Score = 28.7 bits (61), Expect = 8.6
Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 3/160 (1%)
Frame = +2
Query: 215 LQERELKIASLYEAQQARALDRVRQSPSN-GVSTASSQQPTPVPHQPGKVRQMFEERRTK 391
L+ + + S ++ Q+ PS G +T +S++ + P P + E+ +
Sbjct: 1386 LKLADCEYLSAFDGNQSMGSASTAAKPSEKGGNTLTSRKSSSTPSLP----EATEKNQNP 1441
Query: 392 AGIDKSYPLQPIHNTERTNRKTLPNGYAKVSNSTTSTRVIVEKRSQKTHTTVSSHSVKKQ 571
G ++T N +A S ++ + S + S Q
Sbjct: 1442 EGASNQTVSADNLAWKQTVETIAENVFASAKTQIISNQLAMNTSSSREARAKHKESGTNQ 1501
Query: 572 QKIDNLVNGSGDLNHN--HEDDISAVKHSLPQSNGEIGTD 685
DN ++G L+ H D+SA+ +S+P N +D
Sbjct: 1502 MHKDN-ISGPSPLSRELEHISDLSAINNSMPAINSSNVSD 1540
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,089,115
Number of Sequences: 53049
Number of extensions: 598587
Number of successful extensions: 3172
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 2900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3154
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -