Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o06
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047658-6|AAY86253.1| 295|Caenorhabditis elegans Hypothetical ... 30 1.7
AL021503-7|CAI79271.1| 277|Caenorhabditis elegans Hypothetical ... 29 3.0
Z75714-7|CAB00064.2| 270|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical ... 29 4.0
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 28 5.3
Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical pr... 28 7.0
U67954-6|AAV28344.1| 452|Caenorhabditis elegans Wrapper/rega-1/... 28 7.0
U67954-5|AAM54179.1| 444|Caenorhabditis elegans Wrapper/rega-1/... 28 7.0
U67954-3|AAM54178.1| 436|Caenorhabditis elegans Wrapper/rega-1/... 28 7.0
AF456363-1|AAL60234.1| 443|Caenorhabditis elegans immunoglobuli... 28 7.0
AF456362-1|AAL60233.1| 435|Caenorhabditis elegans immunoglobuli... 28 7.0
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81073-9|CAB03030.2| 583|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical pr... 27 9.3
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 27 9.3
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 27 9.3
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 27 9.3
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 27 9.3
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 27 9.3
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 27 9.3
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 27 9.3
>AF047658-6|AAY86253.1| 295|Caenorhabditis elegans Hypothetical
protein K03H6.6 protein.
Length = 295
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 110 GYFLFKDSLELTFFNIAFNKVILYIICLNYCTLNFL 3
G K+ L TFF +AF + IL IC+ +C FL
Sbjct: 230 GTMFEKNPLAFTFFFLAFRRKILQTICI-FCACYFL 264
>AL021503-7|CAI79271.1| 277|Caenorhabditis elegans Hypothetical
protein Y68A4A.10b protein.
Length = 277
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Frame = -3
Query: 617 PGTFLVASVRCVEM*AWSSARGP*GYSIVVSFSISRCL------VFQSSISSAVVCTRAF 456
PG ASV C W +RG G +++ S + CL F + CT
Sbjct: 154 PGKIAEASVTCGNDAVWVDSRGIRGNTLIASIAPQSCLPCQTCTAFMDPMVPEATCTVTV 213
Query: 455 ALT---IRL*SCKLSLRISLK*CDRASCLLGLTGNFNQLQSTLP 333
+T + K ++ + + C+ + +L +TG + T P
Sbjct: 214 GMTSAGCATLAVKCAINVGFE-CNDVALILEITGGALETSGTGP 256
>Z75714-7|CAB00064.2| 270|Caenorhabditis elegans Hypothetical
protein ZC434.4 protein.
Length = 270
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 403 FKEIRKDNLQLYKRIVKAKARVQTTAE-LIEDWKTKHREIEKDTTMLYPYGPLAEDHAYI 579
F + KD+ LY+++ ++ ++Q A+ +E + T+ E K+ Y ED
Sbjct: 139 FPSVLKDSTTLYRKLFPSEEQIQEMADTYVERYDTEQTEARKEAKR--KYSEPDEDGWIT 196
Query: 580 STQRTEATKKV 612
T+ +A K V
Sbjct: 197 VTKAKKAAKSV 207
>AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical
protein Y68A4A.10a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 617 PGTFLVASVRCVEM*AWSSARGP*GYSIVVSFSISRCLVFQSSIS 483
PG ASV C W +RG G +++ S + CL Q+ S
Sbjct: 154 PGKIAEASVTCGNDAVWVDSRGIRGNTLIASIAPQSCLPCQTCAS 198
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 617 PGTFLVASVRCVEM*AWSSARGP*GYSIVVSFSISRCLVFQS 492
PG ASV C W +RG G +++ S + CL Q+
Sbjct: 160 PGKIAEASVTCGNDAVWVDSRGIRGNTLIASIAPQNCLPCQT 201
>Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical
protein T04A11.12 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = -3
Query: 374 GLTGNFNQLQSTLPRKKCCLFILNNRLMLVA*ICRFCCVHCSKLRYIGAELNLGGDVSTT 195
GL NF+ L +TL CC I+ N ++L+ I C ++ ++ + ++T
Sbjct: 203 GLVNNFSLLFNTLFWMTCC--IITNFILLLLLIKSRCLLNAQTRSMHSYKVEVSLSLTTF 260
Query: 194 AVMLEYLCVCFRFLC 150
+++ YL +C
Sbjct: 261 SMIFSYLSNAMIVIC 275
>Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical
protein F20E11.7 protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 617 PGTFLVASVRCVEM*AWSSARGP*GYSIVVSFSISRCLVFQS 492
PG ASV C W +RG G +++ S + CL Q+
Sbjct: 67 PGNVAEASVTCGNDAVWVDSRGIRGNTLITSIAPQSCLPCQT 108
>Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical
protein C13G3.3b protein.
Length = 561
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/99 (19%), Positives = 40/99 (40%)
Frame = +2
Query: 380 DTTPGHITLRKYVKIICSFTNVSSKRKLGYRPRLNLLRTGRLSIVKLKRIRQCCILMGPL 559
D G + R+ + S N+S R+L P + + ++++RQCC++
Sbjct: 21 DLISGPVIPRRERRQSSSMFNISQNRELQRLPAIKDADPSERETLFIQKLRQCCVVFDFA 80
Query: 560 RRTTLTFLHSELKLPRRSQVCTGVEET*YTTMASAVTPK 676
E+K +++ V +++ AV P+
Sbjct: 81 NDALSDLKFKEVKRAALNELVDHVSGAPKGSLSDAVYPE 119
>U67954-6|AAV28344.1| 452|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform e
protein.
Length = 452
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 212 GDVSTTAVMLEYLCVCFRFLCFMVLMISISGGGDGYFLFKDSLELTFFNIAFNKVILYII 33
GD+S A +Y C L + ++ +SG L D ELT+ AF+K++ Y +
Sbjct: 292 GDISEEAFG-DYACRISNKLGSVTAVVHVSGRPGPPQLSFDESELTWTVRAFDKILEYQL 350
Query: 32 C 30
C
Sbjct: 351 C 351
>U67954-5|AAM54179.1| 444|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform b
protein.
Length = 444
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 212 GDVSTTAVMLEYLCVCFRFLCFMVLMISISGGGDGYFLFKDSLELTFFNIAFNKVILYII 33
GD+S A +Y C L + ++ +SG L D ELT+ AF+K++ Y +
Sbjct: 284 GDISEEAFG-DYACRISNKLGSVTAVVHVSGRPGPPQLSFDESELTWTVRAFDKILEYQL 342
Query: 32 C 30
C
Sbjct: 343 C 343
>U67954-3|AAM54178.1| 436|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform a
protein.
Length = 436
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 212 GDVSTTAVMLEYLCVCFRFLCFMVLMISISGGGDGYFLFKDSLELTFFNIAFNKVILYII 33
GD+S A +Y C L + ++ +SG L D ELT+ AF+K++ Y +
Sbjct: 276 GDISEEAFG-DYACRISNKLGSVTAVVHVSGRPGPPQLSFDESELTWTVRAFDKILEYQL 334
Query: 32 C 30
C
Sbjct: 335 C 335
>AF456363-1|AAL60234.1| 443|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1B protein.
Length = 443
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 212 GDVSTTAVMLEYLCVCFRFLCFMVLMISISGGGDGYFLFKDSLELTFFNIAFNKVILYII 33
GD+S A +Y C L + ++ +SG L D ELT+ AF+K++ Y +
Sbjct: 283 GDISEEAFG-DYACRISNKLGSVTAVVHVSGRPGPPQLSFDESELTWTVRAFDKILEYQL 341
Query: 32 C 30
C
Sbjct: 342 C 342
>AF456362-1|AAL60233.1| 435|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1A protein.
Length = 435
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 212 GDVSTTAVMLEYLCVCFRFLCFMVLMISISGGGDGYFLFKDSLELTFFNIAFNKVILYII 33
GD+S A +Y C L + ++ +SG L D ELT+ AF+K++ Y +
Sbjct: 275 GDISEEAFG-DYACRISNKLGSVTAVVHVSGRPGPPQLSFDESELTWTVRAFDKILEYQL 333
Query: 32 C 30
C
Sbjct: 334 C 334
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical
protein C26H9A.1 protein.
Length = 966
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 139 KTIKQRKRKHTHKYSSITAVVDTSPPRFSSAPM 237
K++K +R T + + VVD PPRF A +
Sbjct: 767 KSLKSLRRNGTTVSAPTSPVVDAGPPRFEDAEL 799
>Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical
protein F49C5.9 protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 179 YLCVCFRFLCFMVLMISISGGGDGYFLFKDSLELTFFNIAFNKVILYIIC 30
YL L FM M+ +S G F+ L FF I+ K++ IIC
Sbjct: 111 YLSSTVVLLYFMPTMLLLSFGLIYNFMSLKQLTTVFFKISIEKLLKRIIC 160
>Z81073-9|CAB03030.2| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 412 IRKDNLQLYKRIVKAKARVQTTAELIED--WKTKHREIEKDTTMLY 543
IRKD+ ++ K I K A+L++D W T+H +EKDT Y
Sbjct: 93 IRKDDPRIDKMIQNIK-----DADLLDDFVWGTQHIYLEKDTFKRY 133
>Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 412 IRKDNLQLYKRIVKAKARVQTTAELIED--WKTKHREIEKDTTMLY 543
IRKD+ ++ K I K A+L++D W T+H +EKDT Y
Sbjct: 93 IRKDDPRIDKMIQNIK-----DADLLDDFVWGTQHIYLEKDTFKRY 133
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 574 YISTQRTEATKKVPGLYWSGGDVIHDNGFGCYA 672
Y S Q + + + G GGD+ H NG G Y+
Sbjct: 56 YASYQGSVFHRVIKGFMIQGGDITHGNGTGGYS 88
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 574 YISTQRTEATKKVPGLYWSGGDVIHDNGFGCYA 672
Y S Q + + + G GGD+ H NG G Y+
Sbjct: 56 YASYQGSVFHRVIKGFMIQGGDITHGNGTGGYS 88
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 574 YISTQRTEATKKVPGLYWSGGDVIHDNGFGCYA 672
Y S Q + + + G GGD+ H NG G Y+
Sbjct: 56 YASYQGSVFHRVIKGFMIQGGDITHGNGTGGYS 88
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 241 RNFEQWTQQNRQIYATNINLLFNIKRQHFLR 333
R +QWT + QI ++ L ++K+QH +
Sbjct: 39 RRHKQWTTVHEQIMIKHMELCVDLKKQHLAK 69
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 481 ELIEDWKTKHREIEKDTTMLYPYGPLAEDHAYISTQRTEATKK 609
ELIE K + + I+ + Y DH Y TQ+++ +K
Sbjct: 68 ELIEPKKRRMKPIKTTRREMAIYENYFRDHGYFETQKSDVNRK 110
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 481 ELIEDWKTKHREIEKDTTMLYPYGPLAEDHAYISTQRTEATKK 609
ELIE K + + I+ + Y DH Y TQ+++ +K
Sbjct: 68 ELIEPKKRRMKPIKTTRREMAIYENYFRDHGYFETQKSDVNRK 110
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 139 KTIKQRKRKHTHKYSSITAVVDTSPPRFSSAPM 237
K++K +R T + + VVD PPRF A +
Sbjct: 767 KSLKSLRRNGTTVSAPTSPVVDAGPPRFEDAEL 799
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,005,758
Number of Sequences: 27780
Number of extensions: 314833
Number of successful extensions: 938
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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