Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2o01
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 242 1e-64
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 98 4e-21
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 98 4e-21
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 96 2e-20
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 94 7e-20
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 94 7e-20
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 90 1e-18
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 83 2e-16
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 75 5e-14
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 73 1e-13
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 71 8e-13
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 68 7e-12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 67 9e-12
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 67 9e-12
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 54 9e-08
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 51 9e-07
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 42 4e-04
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 39 0.004
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 38 0.005
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 38 0.007
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 2.3
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 29 4.0
AY305846-1|AAR11990.1| 404|Caenorhabditis elegans nuclear recep... 27 9.2
AF016438-11|AAK84530.2| 404|Caenorhabditis elegans Nuclear horm... 27 9.2
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 242 bits (593), Expect = 1e-64
Identities = 111/191 (58%), Positives = 145/191 (75%), Gaps = 7/191 (3%)
Frame = +1
Query: 121 SSPSAGKRRMDTDVIKLIESKHEVTILSGLNEFCVKFFGPPGTPYEGGVWRVRVHLPDHY 300
S+ + GKRR+D DV+KLI HEV I++G +EF V+F GP T YE GVWR+RV +PD Y
Sbjct: 3 SATAIGKRRIDCDVVKLISHNHEVQIVNGCSEFIVRFHGPKDTAYENGVWRIRVDMPDKY 62
Query: 301 PFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIFESFLPQLLTYPNPIDP 480
PFKSPSIGF+NK++HPNIDE SGTVCLDVINQAWTALYDL+NIF++FLPQLLTYPN DP
Sbjct: 63 PFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYDLTNIFDTFLPQLLTYPNAADP 122
Query: 481 LNGDAAAMYLHKPEEYKKKVCDYVRKFATEEALLE---KDAITGVGASANKASNG----N 639
LNG+AA +Y+HKPEEY++ +YV +FA+E +E + ++ ++ +G +
Sbjct: 123 LNGEAARLYIHKPEEYRRTCREYVMRFASEHRAIEGCSPGNAYSISSTPSEHYDGHPQDD 182
Query: 640 DSDSESSMSDF 672
D +S SSMS+F
Sbjct: 183 DDESCSSMSEF 193
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/110 (38%), Positives = 67/110 (60%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALY 414
GPP +PY+GGV+ + +H P YPFK P + F ++YHPNI+ +G++CLD++ W+
Sbjct: 39 GPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPAL 97
Query: 415 DLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFA 564
+S + S + LL PNP DPL + A +Y E Y + ++ +K+A
Sbjct: 98 TISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 146
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/110 (38%), Positives = 67/110 (60%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALY 414
GPP +PY+GGV+ + +H P YPFK P + F ++YHPNI+ +G++CLD++ W+
Sbjct: 39 GPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPAL 97
Query: 415 DLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFA 564
+S + S + LL PNP DPL + A +Y E Y + ++ +K+A
Sbjct: 98 TISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 146
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 96.3 bits (229), Expect = 2e-20
Identities = 40/110 (36%), Positives = 61/110 (55%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALY 414
GPP TPY GG++ + + +PD YPF P++ F K++HPN+ +G +CLD++ W A
Sbjct: 45 GPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASL 104
Query: 415 DLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFA 564
L + S + L+ P P DP + A Y+ KP +K + KFA
Sbjct: 105 TLRTVLLS-IQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFA 153
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 94.3 bits (224), Expect = 7e-20
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = +1
Query: 232 FGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTAL 411
FGP TP+E G +++ + + YP K P++ F++K++HPN+ G++CLD++ W+
Sbjct: 41 FGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNV-YADGSICLDILQNRWSPT 99
Query: 412 YDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFATEEALLEKD 591
YD++ I S + LL PNP P N AA +Y EY+K+V V + E D
Sbjct: 100 YDVAAILTS-IQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWLNFGENEGD 158
Query: 592 AI--TGVGASANKASNGNDSDSE 654
A+ V A ND+D +
Sbjct: 159 AVLKDDVEIEEIAAPGANDADDD 181
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 94.3 bits (224), Expect = 7e-20
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = +1
Query: 232 FGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTAL 411
FGP TP+E G +++ + + YP K P++ F++K++HPN+ G++CLD++ W+
Sbjct: 41 FGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNV-YADGSICLDILQNRWSPT 99
Query: 412 YDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFATEEALLEKD 591
YD++ I S + LL PNP P N AA +Y EY+K+V V + E D
Sbjct: 100 YDVAAILTS-IQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWLNFGENEGD 158
Query: 592 AI--TGVGASANKASNGNDSDSE 654
A+ V A ND+D +
Sbjct: 159 AVLKDDVEIEEIAAPGANDADDD 181
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/121 (34%), Positives = 65/121 (53%)
Frame = +1
Query: 202 SGLNEFCVKFFGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCL 381
S F V GP +P+ GGV+++ + LP+ YP +P + FM K+YHPNID++ G +CL
Sbjct: 31 SNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKL-GRICL 89
Query: 382 DVINQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKF 561
D++ W+ + + S + LL+ PNP DPL D A + E K + +
Sbjct: 90 DILKDKWSPALQIRTVLLS-IQALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWTMNY 148
Query: 562 A 564
A
Sbjct: 149 A 149
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 82.6 bits (195), Expect = 2e-16
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 15/140 (10%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIG---------------FMNKVYHPNIDEVSG 369
GP GTPY GG + ++V +P+HYPF+ P + F+ +++HPNI +G
Sbjct: 59 GPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTG 118
Query: 370 TVCLDVINQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDY 549
T+CLD++ WTA L + S L +L P P DP + A +++ + +
Sbjct: 119 TICLDILKDKWTASLTLRTVLLS-LQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYW 177
Query: 550 VRKFATEEALLEKDAITGVG 609
FA + +E D VG
Sbjct: 178 TSYFANSKKDVEPDFNRKVG 197
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 74.9 bits (176), Expect = 5e-14
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Frame = +1
Query: 223 VKFFGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN--- 393
V GPP T YEGG ++ + P YP K P + F+++++HPNID+ G VC+ +++
Sbjct: 38 VLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDK-EGNVCISILHDPG 96
Query: 394 ----------QAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVC 543
+ W ++ + I S + +LT PN P N DAA M E+KKKV
Sbjct: 97 DDKWGYERPEERWLPVHTVETILLSVI-SMLTDPNFESPANVDAAKMQRENYAEFKKKVA 155
Query: 544 DYVRKFATE 570
VR+ E
Sbjct: 156 QCVRRSQEE 164
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 73.3 bits (172), Expect = 1e-13
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Frame = +1
Query: 121 SSPSAGKRRMDTDVIKLIESKHEVTILSGLNE-----FCVKFFGPPGTPYEGGVWRVRVH 285
+S S+G R T +K ++S+ +NE + V +GPP T Y+GG ++ +
Sbjct: 5 ASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIR 64
Query: 286 LPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN-------------QAWTALYDLSN 426
P +YP+ PS+ F KV+HPN+ E +G +C+ +++ + W +
Sbjct: 65 FPSNYPYSPPSMKFTTKVWHPNVYE-NGDLCISILHSPIDDPQSGELACERWNPTQSVRT 123
Query: 427 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFATE-EALLEKDAI 597
I S + LL PN P N DA+ MY E+ + V K E + + +KD I
Sbjct: 124 ILLSVI-SLLNEPNTSSPANVDASVMYRKWKEDQDPEYAKIVTKQVEESKKVAQKDGI 180
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +1
Query: 238 PPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN-QAWTALY 414
P PY G ++V + P YPFK P + F K+YHPN+DE G CL ++ + W
Sbjct: 41 PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDE-EGKFCLPIVTAENWKPAT 99
Query: 415 DLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFA 564
+ + L L+ P P P+ D A + +++ K ++ RK A
Sbjct: 100 KTEQVMMALL-SLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCL-DVINQAW--- 402
G TPYEGG++ + + + + YPFK+P++ F+ K++HP++ GT+CL DV N W
Sbjct: 387 GVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVS 446
Query: 403 TALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFA 564
+Y + + +S++ N +P++ + + E ++K + ++FA
Sbjct: 447 MTIYKVLIVIQSWMSNF----NEKEPIDVEILEQATNNREVFEKTAEFWTKRFA 496
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 67.3 bits (157), Expect = 9e-12
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI--NQAWTA 408
G T +EGG++R+R+ D +P P F ++HPN+ SGTVCL ++ N+ W
Sbjct: 47 GRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNV-YPSGTVCLSLLDENKDWKP 105
Query: 409 LYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFATE 570
+ + + LL +PN DP +A +Y EY+K+V K+A E
Sbjct: 106 SISIKQLLIG-IQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYAAE 158
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 67.3 bits (157), Expect = 9e-12
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI--NQAWTA 408
G T +EGG++R+R+ D +P P F ++HPN+ SGTVCL ++ N+ W
Sbjct: 47 GRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNV-YPSGTVCLSLLDENKDWKP 105
Query: 409 LYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFATE 570
+ + + LL +PN DP +A +Y EY+K+V K+A E
Sbjct: 106 SISIKQLLIG-IQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYAAE 158
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 61.3 bits (142), Expect = 6e-10
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +1
Query: 217 FCVKFFGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQ 396
F K G G Y+ ++ + + + YPFK P + F + VYHPN+D V+ +C ++ Q
Sbjct: 46 FQFKIIGD-GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQ 104
Query: 397 A-WTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKF 561
W + ++ + + LL P+ P+N DAA Y+H E+ KK + +K+
Sbjct: 105 ENWKPETTMEDVLLNLI-VLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAKKW 159
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Frame = +1
Query: 253 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQ------AWTALY 414
Y GG +R ++ +P Y P + + KV+HPNI+E G++CL ++ Q W
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINE-DGSICLSILRQNSLDQYGWRPTR 130
Query: 415 DLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKF 561
+L+++ + + D LN AA M+ E + +V +Y+ ++
Sbjct: 131 NLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 54.0 bits (124), Expect = 9e-08
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI-------- 390
GP T + GV+ R+ P YP P + F ++HPNI G VC+ ++
Sbjct: 43 GPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNI-YADGRVCISILHAPGDDPT 101
Query: 391 -----NQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVR 555
N+ W+ + + I S + +L PN P N AA M+ +++K VR
Sbjct: 102 GYELSNERWSPVQSIEKILLSVV-SMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVR 160
Query: 556 K 558
K
Sbjct: 161 K 161
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQA-WTAL 411
GP G+P+EGG + V V+ +P P F ++HPN+D + G++ L ++ Q W++
Sbjct: 77 GPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVD-LRGSIYLKMLEQEHWSSE 134
Query: 412 YDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDY 549
L + + LL P+ N +A Y ++ E Y+ K Y
Sbjct: 135 TSLKKLLRE-ISNLLATPDLTQAANIEAWMEYENQRENYEAKARAY 179
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +1
Query: 208 LNEFCVKFFGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVY--HPNIDEVSGTVCL 381
L ++ + G GT Y G V+ ++ YPF SP + F+ + HP+I +G +CL
Sbjct: 35 LKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYS-NGHICL 93
Query: 382 DVINQAWTALYDLSNIFESFLPQLLTYPNPIDPLN 486
+++ WT + ++ S L L + P++
Sbjct: 94 SILSDDWTPALSVQSVCLSILSMLSSSKEKKHPID 128
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 208 LNEFCVKFFGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDV 387
L + GPP TPYE ++ +++ +YP + P++ F KV+ +++ +G +
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97
Query: 388 IN--QAWTALYDLSNIFESFLPQLL 456
+ + W+ Y + + E ++
Sbjct: 98 LTTLRNWSNSYMIKTVLEDIRKNMM 122
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLD 384
GP TPYE GV+ V + PD+YP P I F +++ ++ +G V ++
Sbjct: 37 GPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIE 86
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFM-----NKVYHPNIDEVSGTVCLDVI 390
GP TPY G++ + P YPF P F+ N ++PN+ G +CL ++
Sbjct: 451 GPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYN-DGKICLSIL 506
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 121 SSPSAGKRRMDTDVIKL---IESKHEVTILSGLNEFCVKFFGPPGTPYEGGVWRVRVHLP 291
++ +AG RR+ + ++L E H + L E+ G GT +EGG++ R+ P
Sbjct: 6 NTKNAGVRRLMKEAMELRQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFP 65
Query: 292 DHYPFKSPSIGFMNKVYHPN-IDEVSGTVCLDV 387
YP K P++ + PN E++ VCL +
Sbjct: 66 ADYPMKPPNLILLT----PNGRFELNKKVCLSI 94
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 235 GPPGTPYEGGVWRVRVHLPDHYPFKSPSI 321
G P TPYEGG++ ++ P +PFK P+I
Sbjct: 46 GAPKTPYEGGIYMGKLLFPKDFPFKPPAI 74
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/121 (21%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Frame = +1
Query: 253 YEGGVWRVRVHLPDHYPFKS--PSIGF-MNKVYHPNIDEVSGTVCLD-VINQAW-TALYD 417
+ GG++R +H+P +P S P + F + ++HP I S +CL+ + W +
Sbjct: 62 FGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKELCLNRSFPEGWKKEKHS 121
Query: 418 LSNIFESFLPQLLTYPNPIDP-LNGDAAAMYLHKPEEYKK--KVCDYVRKFATEEALLEK 588
L + +Y D +N +A+ +Y +++++ K C + + L E+
Sbjct: 122 LRRVLVVLQRSFYSYDVDTDKCINPEASVLYKEHRDKFREIAKECVEASRSMVYDELAEQ 181
Query: 589 D 591
+
Sbjct: 182 E 182
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -3
Query: 327 ETDGRRLEGVMIGKVHAYSPHTTFVWRSWRSEEFHAELVKAAQDCHFVLAFDKFDDI 157
ETD R + + ++ + H F W +WR +E +E V +++ F +AFD+ DI
Sbjct: 1786 ETDDRGFKTLQGDQLAGFF-HREFNWVTWRMDEDKSERVFVSEE--FDVAFDRDADI 1839
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 121 SSPSAGKRRMDTDVIKLIESKHE-VTILSGLNE-----FCVKFFGPPGTPYEGGVWRVRV 282
++ S+ RR+ D KL++ + + L + +C++ G P TP+ GG + +V
Sbjct: 15 TASSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLR--GSPDTPFYGGYYWGKV 72
Query: 283 HLPDHYPFKSPSI 321
+++P+ P+I
Sbjct: 73 IFKENFPWSPPAI 85
>AY305846-1|AAR11990.1| 404|Caenorhabditis elegans nuclear receptor
NHR-126 protein.
Length = 404
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 340 YHPNIDEVSGTVCLDVINQAWTALYDLSNIFES 438
Y P E+ +V L+++ +W A L IFE+
Sbjct: 205 YFPEFRELDESVKLEIVKTSWVAWTRLDKIFET 237
>AF016438-11|AAK84530.2| 404|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 126 protein.
Length = 404
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 340 YHPNIDEVSGTVCLDVINQAWTALYDLSNIFES 438
Y P E+ +V L+++ +W A L IFE+
Sbjct: 205 YFPEFRELDESVKLEIVKTSWVAWTRLDKIFET 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,437,853
Number of Sequences: 27780
Number of extensions: 281298
Number of successful extensions: 921
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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