Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n23
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    32   0.005
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.2  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   7.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   7.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 64  CIESYACPLLYLSCVATESVK*IVFF*HLLRVVVIDNVFFCLFVV*T 204
           CI  +  PL +L C+       I+F  HLL ++ I + FFC F++ T
Sbjct: 132 CIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYH-FFCAFIIFT 177


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 233 GKNIQKFVSCKARIYYMIVSLSLTLR 310
           G N  KF++C     +++ S SL LR
Sbjct: 16  GSNFSKFINCHYTSGHLLGSSSLPLR 41


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 184  CLFVV*TTINCFIGLSWEKYTKIC 255
            CL+      NC  GL W+    IC
Sbjct: 1297 CLWGKYEVFNCAPGLHWDNNKNIC 1320



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 214  CFIGLSWEKYTKIC 255
            C  GL W K  KIC
Sbjct: 1131 CAGGLHWNKERKIC 1144


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 453 PNIYTYHIIIYYALN 409
           P  YTY II Y ALN
Sbjct: 148 PPHYTYQIIPYEALN 162


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 43  NVCSKYSCIESYACPLLYLSCVAT 114
           N  S+ SC+ S    +L L+C+ T
Sbjct: 232 NPASRSSCLGSNTSSMLSLNCLNT 255


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +3

Query: 141 LASIT-RSSNR*CFFLFVCCIN 203
           L ++T  ++NR  ++L VCC+N
Sbjct: 43  LTNLTYNNTNRKYYWLNVCCLN 64


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 43  NVCSKYSCIESYACPLLYLSCVAT 114
           N  S+ SC+ S    +L L+C+ T
Sbjct: 21  NPASRSSCLGSNTSSMLSLNCLNT 44


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 43  NVCSKYSCIESYACPLLYLSCVAT 114
           N  S+ SC+ S    +L L+C+ T
Sbjct: 21  NPASRSSCLGSNTSSMLSLNCLNT 44


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 564 PDHRESNYKIIYMKIVVKVHLSLNRYVINITVN*K*FHNFKVWS 695
           P HR    +I Y   +  +     R +  +  N +  H FK+W+
Sbjct: 378 PTHRHPQDEIPYCGKIFNLTTRQVRTLYKLPPNYEIRHKFKLWN 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,708
Number of Sequences: 336
Number of extensions: 3588
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)