Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n23
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77662-16|CAJ90504.1|  424|Caenorhabditis elegans Hypothetical p...    29   3.2  
AL033512-5|CAA22073.2|  424|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF016431-1|AAC24248.2|  311|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z77662-16|CAJ90504.1|  424|Caenorhabditis elegans Hypothetical
           protein Y49A3A.1 protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -3

Query: 546 NKLMIKKLWYDYIIIYYVCIP*NLLHYFRLIPNIYTYHIIIYY 418
           ++L +KK W   ++ Y + +  NLL    LI N+ T  ++ +Y
Sbjct: 75  DELCMKKFWEAVVLYYPLWVAPNLLTLIGLIVNLTTVLVLSFY 117


>AL033512-5|CAA22073.2|  424|Caenorhabditis elegans Hypothetical
           protein Y49A3A.1 protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -3

Query: 546 NKLMIKKLWYDYIIIYYVCIP*NLLHYFRLIPNIYTYHIIIYY 418
           ++L +KK W   ++ Y + +  NLL    LI N+ T  ++ +Y
Sbjct: 75  DELCMKKFWEAVVLYYPLWVAPNLLTLIGLIVNLTTVLVLSFY 117


>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
           protein C09H6.1b protein.
          Length = 1309

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 218 KQLIVVYTTNKQ-KKTLSITTTRNRC*KNTIYLTDSVATQDK*SSG 84
           K  I V TT K  KKT+ IT  R RC  +  + T +V   ++ S G
Sbjct: 304 KPKIFVKTTKKNLKKTMKITKVRQRC-PHCPFTTSTVTRLNRHSGG 348


>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
           protein C09H6.1a protein.
          Length = 1311

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 218 KQLIVVYTTNKQ-KKTLSITTTRNRC*KNTIYLTDSVATQDK*SSG 84
           K  I V TT K  KKT+ IT  R RC  +  + T +V   ++ S G
Sbjct: 304 KPKIFVKTTKKNLKKTMKITKVRQRC-PHCPFTTSTVTRLNRHSGG 348


>AF016431-1|AAC24248.2|  311|Caenorhabditis elegans Hypothetical
           protein C10B5.1 protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1

Query: 148 LLRVVVIDNVFFCLFVV*TTINCFIGLSWEKYTKICF 258
           ++R + +D+V FC F++  +   F     ++Y K+C+
Sbjct: 94  VIRTIEVDHVGFCNFLILQSQLLFASTDDKRYAKLCW 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,536,935
Number of Sequences: 27780
Number of extensions: 321150
Number of successful extensions: 686
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)