Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2n17
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 278 5e-76
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 145 5e-36
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 144 1e-35
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 143 2e-35
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 143 2e-35
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 131 1e-31
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 113 2e-26
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 108 7e-25
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 52 8e-08
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.6
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 27 3.4
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 27 3.4
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 3.4
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 5.9
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 7.9
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 278 bits (682), Expect = 5e-76
Identities = 136/196 (69%), Positives = 164/196 (83%)
Frame = +3
Query: 96 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 275
L ++G + G+ VR QNV+ N+VKSSLGPVGLDKMLVDDIGDVTVTNDGATIL +
Sbjct: 10 LFLSGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSL 69
Query: 276 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 455
L+VEHPA KVLVELAQ QD+EVGDGTTSVVIIAAELL+ A+ELVK KIHPT+II+GYRLA
Sbjct: 70 LDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLA 129
Query: 456 CKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNP 635
+EAVK++ D L+ +V+SLG+ SLIN AKT+MSSK+IG D+DFFS M VDA ++KT N
Sbjct: 130 IREAVKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNS 189
Query: 636 RGNTIYPIKAINILKA 683
+G T YP+KA+NILKA
Sbjct: 190 KGETRYPVKAVNILKA 205
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 145 bits (352), Expect = 5e-36
Identities = 77/178 (43%), Positives = 118/178 (66%), Gaps = 5/178 (2%)
Frame = +3
Query: 105 AGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI-GDVTVTNDGATILKMLE 281
+G + G+ R + + ++VKS+LGP G+DK+L + GD+ VTNDGATILK +
Sbjct: 12 SGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIA 71
Query: 282 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 461
+++ AAKVLV ++++QD+EVGDGTTSV + AAELL+ A+ +V KIHP II GYR+A K
Sbjct: 72 LDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATK 131
Query: 462 EAVKYIQ----DNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIK 623
A+ ++ DN + + R L N A+TT+SSK++ + + F+++ VDA +K
Sbjct: 132 TAIDALRASSIDNSSDPAKF--RSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLK 187
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 144 bits (348), Expect = 1e-35
Identities = 72/166 (43%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Frame = +3
Query: 126 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 305
D V++ +++ NIV++SLGP GLDK+L+ G++TVTNDGATIL +EVEH AK+
Sbjct: 34 DAVKS-HILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKL 92
Query: 306 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD 485
LV+L++ QD+E+GDGTT VV++A LL+ A+ L+ IHP I GY AC+ AVK++
Sbjct: 93 LVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDA 152
Query: 486 -NLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAI 620
+ V +L +AKT++ SK++ D F+ + VDA ++
Sbjct: 153 ISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSV 198
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 143 bits (347), Expect = 2e-35
Identities = 77/183 (42%), Positives = 116/183 (63%)
Frame = +3
Query: 132 VRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLV 311
VR N+M + +++SLGP G+DKM+ G+V +TNDGATILK L V HPAAK+LV
Sbjct: 20 VRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLV 79
Query: 312 ELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNL 491
+L+ QD E GDGTTSVVI+A +L A++L+K IHPT I ++ A V +++N
Sbjct: 80 DLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKEN- 138
Query: 492 TVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAIN 671
+ +E R SL+ A T+++SK++ ++ + + VDA +K ++PR T +K I
Sbjct: 139 ALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDA--VLKVIDPRVATNVDLKDIR 196
Query: 672 ILK 680
I+K
Sbjct: 197 IVK 199
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 143 bits (346), Expect = 2e-35
Identities = 75/172 (43%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Frame = +3
Query: 144 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 323
N+ + ++++LGP+G DK++VDD G+V ++NDGATI+K+L++ HPAAK LV++A+
Sbjct: 29 NINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIAR 88
Query: 324 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD---NLT 494
QD EVGDGTTSVV+ A ELL+ A V+ + II GYR A + AV I++ +L
Sbjct: 89 AQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLD 148
Query: 495 VTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTI 650
++ E R L A T M+SKLI +++ FF++MVVDA + + N I
Sbjct: 149 LSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENMI 200
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 131 bits (316), Expect = 1e-31
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Frame = +3
Query: 96 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 275
++ G R G + N+ +++++ LGP + KML+D +G V +TNDG IL+
Sbjct: 8 MNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILRE 67
Query: 276 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 455
+EV HPAAK ++ELA+ QDEEVGDGTTSV+I+A E+L A L+ KIHP +I ++ A
Sbjct: 68 IEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQA 127
Query: 456 CKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAI-KTMN 632
++A+ I D +T+ V + +T + +KL+ +D + + A + + T N
Sbjct: 128 LEDALSII-DEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTVASTSN 186
Query: 633 PR 638
R
Sbjct: 187 GR 188
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 113 bits (273), Expect = 2e-26
Identities = 57/160 (35%), Positives = 94/160 (58%)
Frame = +3
Query: 144 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 323
N+ +++KS+LGP G KMLVD G + +T DG +L +++++P A + + A
Sbjct: 21 NISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAAT 80
Query: 324 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTV 503
QD+ GDGTTSV ++ ELLK A+ ++ +HP+ I G+ LA EA+ ++ D+
Sbjct: 81 AQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFL-DSFKTDF 139
Query: 504 ESLGRPSLINTAKTTMSSKLIGADADFFSEMVVDAAQAIK 623
E + R L+N AKT++S+K+ + + VVDA I+
Sbjct: 140 E-VDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIR 178
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 108 bits (260), Expect = 7e-25
Identities = 58/170 (34%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Frame = +3
Query: 174 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGT 353
I ++SLGP G +K++V+ + +TND ATI++ LEV HPAAK++V+ Q Q+ E+GD
Sbjct: 41 ITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELGDAA 100
Query: 354 TSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESL-GRPSLI 530
VV+ ELL A+ +++ + P I GY +A ++ +++ +E++ LI
Sbjct: 101 NFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELI 160
Query: 531 NTAKTTMSSKLIGADADFFSEMVVDAAQAIKTMNPRGNTIYPIKAINILK 680
+T +SSK G + DF S++V A+AI T+ P+ + + + I ++K
Sbjct: 161 KAIRTCISSKQYG-NEDFLSDLV---AKAILTVLPKDPSKFNVDNIRVVK 206
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 52.0 bits (119), Expect = 8e-08
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Frame = +3
Query: 177 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 344
V +LGP G + ++ G +T DG T+ + + + E+ A+++ ++A +E G
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
Query: 345 DGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNL--TVTVESLGR 518
DGTT+ ++ + V +P + G +LA V+++Q N T E + +
Sbjct: 118 DGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTSEEISQ 177
Query: 519 PSLINTAKTTMSSKLI 566
+ I+ T +L+
Sbjct: 178 VATISANGDTHIGELL 193
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 354 TSVVIIAAELLKNADELVKTKIHPTSIISGY 446
T++++++ LL E + TK+HP+ +S Y
Sbjct: 302 TNLIVVSVALLHQWAEELSTKVHPSKKLSVY 332
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 26.6 bits (56), Expect = 3.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 184 APLGQLVWIRCWLTILGM 237
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 3.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 587 LGDGCRCCTGNQNNEPQRKYYIP 655
+ +GC+C G Q+ Y+IP
Sbjct: 364 INEGCKCVVGGLPRSEQKGYFIP 386
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.6 bits (56), Expect = 3.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 184 APLGQLVWIRCWLTILGM 237
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 187 PLGQLVWIRCWLTILGM 237
PLG+++WI W +LG+
Sbjct: 145 PLGKMMWIFAWRWLLGL 161
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 318 AQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLT 494
A L DE G V+++A + K LV I+P ++ A +K DN+T
Sbjct: 192 ASLLDEGTAAGEAMVMLMANDKKKRKTFLVDKNIYPNTLSVLRTRASGFGIKIELDNIT 250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,786,608
Number of Sequences: 5004
Number of extensions: 55148
Number of successful extensions: 151
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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