Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n13
         (636 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QPY9 Cluster: IP05691p; n=3; Diptera|Rep: IP05691p - ...   116   4e-25
UniRef50_Q16HY4 Cluster: Putative uncharacterized protein; n=2; ...   107   3e-22
UniRef50_Q46GK1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_Q4QPY9 Cluster: IP05691p; n=3; Diptera|Rep: IP05691p -
           Drosophila melanogaster (Fruit fly)
          Length = 101

 Score =  116 bits (280), Expect = 4e-25
 Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = +3

Query: 210 SMRIMLLIFCGALLIVVPSMCRPYDPEDKSLKDV-LPSSGQFEAFYPRETHGIPNGSSRP 386
           ++ +  L   G  ++  P     YDP D  + +  LP  G FEAFYPRE  GIPN +SRP
Sbjct: 5   ALLLKALFVLGLTVLSGPGRVAAYDPNDPKIAECCLPPEGMFEAFYPREVEGIPNSASRP 64

Query: 387 AHGHGSFYNYRNPALVDVKNAPAYGFRFDGMRRF 488
           AHGHGSF+ +RNPALVD KNA AYG+RFDG RRF
Sbjct: 65  AHGHGSFFKHRNPALVDTKNAAAYGYRFDGKRRF 98


>UniRef50_Q16HY4 Cluster: Putative uncharacterized protein; n=2;
           Endopterygota|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 93

 Score =  107 bits (256), Expect = 3e-22
 Identities = 48/81 (59%), Positives = 59/81 (72%)
 Frame = +3

Query: 246 LLIVVPSMCRPYDPEDKSLKDVLPSSGQFEAFYPRETHGIPNGSSRPAHGHGSFYNYRNP 425
           L +V  +    YDPED  LK+V+P++G F AFYPRE +G  NG++R    HGSFY  RNP
Sbjct: 10  LALVCLTSVMTYDPEDVELKNVIPANGTFAAFYPREMYGNRNGNARAPFAHGSFYKNRNP 69

Query: 426 ALVDVKNAPAYGFRFDGMRRF 488
           ALVDV+NA AYG+RFDG RRF
Sbjct: 70  ALVDVRNAAAYGYRFDGKRRF 90


>UniRef50_Q46GK1 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina barkeri str. Fusaro|Rep: Putative
           uncharacterized protein - Methanosarcina barkeri (strain
           Fusaro / DSM 804)
          Length = 610

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +3

Query: 114 PIAYLVFYANSLRNRPLFLIKSCFSTATS*TISMRIMLLIFCGALLIVVPSM 269
           P+ + V    SL N  +FL+ S  ST +S   ++    +IFC ALL+ +P +
Sbjct: 75  PLIFWVSLLFSLING-MFLLLSSISTRSSKQFNLGFFQIIFCNALLVFLPKL 125


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,309,412
Number of Sequences: 1657284
Number of extensions: 9857780
Number of successful extensions: 19499
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19495
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)