Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n13
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023627-1|AAY85027.1|  101|Drosophila melanogaster IP05691p pro...   116   2e-26
AE013599-542|AAM68874.1|  101|Drosophila melanogaster CG30380-PA...   116   2e-26
BT030410-1|ABO52830.1|  592|Drosophila melanogaster IP08946p pro...    30   3.0  

>BT023627-1|AAY85027.1|  101|Drosophila melanogaster IP05691p
           protein.
          Length = 101

 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = +3

Query: 210 SMRIMLLIFCGALLIVVPSMCRPYDPEDKSLKDV-LPSSGQFEAFYPRETHGIPNGSSRP 386
           ++ +  L   G  ++  P     YDP D  + +  LP  G FEAFYPRE  GIPN +SRP
Sbjct: 5   ALLLKALFVLGLTVLSGPGRVAAYDPNDPKIAECCLPPEGMFEAFYPREVEGIPNSASRP 64

Query: 387 AHGHGSFYNYRNPALVDVKNAPAYGFRFDGMRRF 488
           AHGHGSF+ +RNPALVD KNA AYG+RFDG RRF
Sbjct: 65  AHGHGSFFKHRNPALVDTKNAAAYGYRFDGKRRF 98


>AE013599-542|AAM68874.1|  101|Drosophila melanogaster CG30380-PA
           protein.
          Length = 101

 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = +3

Query: 210 SMRIMLLIFCGALLIVVPSMCRPYDPEDKSLKDV-LPSSGQFEAFYPRETHGIPNGSSRP 386
           ++ +  L   G  ++  P     YDP D  + +  LP  G FEAFYPRE  GIPN +SRP
Sbjct: 5   ALLLKALFVLGLTVLSGPGRVAAYDPNDPKIAECCLPPEGMFEAFYPREVEGIPNSASRP 64

Query: 387 AHGHGSFYNYRNPALVDVKNAPAYGFRFDGMRRF 488
           AHGHGSF+ +RNPALVD KNA AYG+RFDG RRF
Sbjct: 65  AHGHGSFFKHRNPALVDTKNAAAYGYRFDGKRRF 98


>BT030410-1|ABO52830.1|  592|Drosophila melanogaster IP08946p
           protein.
          Length = 592

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = +2

Query: 410 QLPQPGAGGCEERA---RLRFSFRWNA 481
           QLPQPGAGG ++ A   RL F  +W A
Sbjct: 260 QLPQPGAGGPQDAAMLSRLGFISQWGA 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,806,307
Number of Sequences: 53049
Number of extensions: 468920
Number of successful extensions: 1186
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)