Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n12
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.15 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   7.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 295 FEVGPRYTSLQ-YIGEGAYGMVVSAF 369
           +E+GP   S Q  IGEGA+G+V  AF
Sbjct: 444 WELGPLKLSFQGVIGEGAFGIVRRAF 469



 Score = 27.1 bits (57), Expect = 0.15
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 613 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 711
           H+     Q+  G++++    V+HRDL   N+L+
Sbjct: 593 HLLSIARQVALGMEHLAKTRVVHRDLAARNVLV 625


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 212 WITSFKPWLKLQVLPAATPTLRLF 283
           W ++ +  L+ Q+  AATP +R +
Sbjct: 267 WFSNRRARLRKQITSAATPLVRSY 290


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 395 ATFDFFTLSKAETTI 351
           +TFDF +L  AET++
Sbjct: 251 STFDFLSLHPAETSM 265


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = -3

Query: 310 VDQLRTLGHE*SQRWGCCWQH-LQLQPWFKTSDPLNTQILQTTGVASIYSFGHGISYS 140
           +D+L+   +         W   L   P+F+  D   T  L     +S+ S GH + YS
Sbjct: 401 IDRLKNANNNELPEHVIMWSSPLTESPYFEKLDVKVTVQLWLGDPSSVLSHGHRVIYS 458


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 143 ITDPVSEGIYAGDAGG 190
           + DP +  +YAG  GG
Sbjct: 270 LADPTNTSLYAGTYGG 285


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 395 ATFDFFTLSKAETTI 351
           +TFDF +L  AET++
Sbjct: 251 STFDFLSLHPAETSM 265


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 438 LAIRLMFEWRYFLNCDFRFLHVV 370
           L  +L F  + F N D+ F H+V
Sbjct: 380 LNTKLQFTAKDFFNLDWTFCHMV 402


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 395 ATFDFFTLSKAETTI 351
           +TFDF +L  AET++
Sbjct: 251 STFDFLSLHPAETSM 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,315
Number of Sequences: 336
Number of extensions: 3441
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)