Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n09
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6FKB1 Cluster: Histone-lysine N-methyltransferase, H3 ...    33   8.2  

>UniRef50_Q6FKB1 Cluster: Histone-lysine N-methyltransferase, H3
           lysine-4 specific; n=1; Candida glabrata|Rep:
           Histone-lysine N-methyltransferase, H3 lysine-4 specific
           - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 1111

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -1

Query: 228 LVSFKSELQGGQRYEFFISWSSIFTTGL*MIINRSTYLQIPKDNPDNKIILATFH--SNF 55
           L+ FKS+L+  +   F         TG  +I N   + ++  D    K+ +A+    +  
Sbjct: 471 LIDFKSKLKAYKCSRFLEH-----ATGFYIIFNNLEHAKLCMDAESGKLTMASRRKRTTV 525

Query: 54  PLIFILLENFTNRFRK 7
           P+ FIL+E FT+RF K
Sbjct: 526 PINFILIEPFTSRFSK 541


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,657,259
Number of Sequences: 1657284
Number of extensions: 12220359
Number of successful extensions: 27243
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 26367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27235
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)