Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n07
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4E41 Cluster: PREDICTED: similar to conserved ...    52   2e-05
UniRef50_UPI0000DB6CE8 Cluster: PREDICTED: similar to armitage C...    45   0.002
UniRef50_Q6J5K9 Cluster: Probable RNA helicase armi; n=2; Drosop...    41   0.037
UniRef50_A0NBL8 Cluster: ENSANGP00000030911; n=2; Culicidae|Rep:...    39   0.15 
UniRef50_Q24GQ1 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_A0DYU8 Cluster: Chromosome undetermined scaffold_7, who...    33   5.6  
UniRef50_UPI00006CC82C Cluster: Leucine Rich Repeat family prote...    33   7.4  
UniRef50_A1ZLR3 Cluster: Two-component hybrid sensor and regulat...    33   7.4  
UniRef50_A0DNZ9 Cluster: Chromosome undetermined scaffold_58, wh...    33   7.4  

>UniRef50_UPI00015B4E41 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 1277

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 21/58 (36%), Positives = 40/58 (68%)
 Frame = +3

Query: 207 QVTTQNRIPNFDQSLNHVHLGHSIEQSKHCEKKEMHQKRIQTLRKELEYIKSTEWEFE 380
           Q +  ++  + ++ LN +     I++++  E KE+H+KR+Q LRKEL+Y+K+TEW ++
Sbjct: 13  QESQSSKSSSTEKFLNQIKSDILIKKNQKQESKELHKKRVQCLRKELDYLKATEWMYQ 70


>UniRef50_UPI0000DB6CE8 Cluster: PREDICTED: similar to armitage
           CG11513-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to armitage CG11513-PA, isoform A -
           Apis mellifera
          Length = 1059

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 16/26 (61%), Positives = 24/26 (92%)
 Frame = +3

Query: 303 KEMHQKRIQTLRKELEYIKSTEWEFE 380
           +E+H KR+Q+LRKEL+YIK+TEW ++
Sbjct: 56  RELHLKRVQSLRKELDYIKATEWRYQ 81


>UniRef50_Q6J5K9 Cluster: Probable RNA helicase armi; n=2;
           Drosophila melanogaster|Rep: Probable RNA helicase armi
           - Drosophila melanogaster (Fruit fly)
          Length = 1274

 Score = 40.7 bits (91), Expect = 0.037
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = +3

Query: 279 EQSKHCEKKEMHQKRIQTLRKELEYIKSTEWEFE 380
           E  K  E  E H KR+Q LRKEL Y+  T+W +E
Sbjct: 51  EGGKAAETTENHLKRLQNLRKELSYLSETDWMYE 84


>UniRef50_A0NBL8 Cluster: ENSANGP00000030911; n=2; Culicidae|Rep:
           ENSANGP00000030911 - Anopheles gambiae str. PEST
          Length = 78

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +3

Query: 306 EMHQKRIQTLRKELEYIKSTEWEFE 380
           E H  R+Q+LRKEL Y+K T+W+++
Sbjct: 45  ENHANRLQSLRKELNYVKETDWQYD 69


>UniRef50_Q24GQ1 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 475

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +3

Query: 192 EAETPQVTTQN-RIPNFDQSLNHVHLG-HSIEQSKHCEKKEMHQKRIQTLRKELEYIKST 365
           EAE   +T +N ++   D+  N+      SI QS+  +K   H+K+ Q L+K    +K  
Sbjct: 357 EAEQTNLTKKNQKLQQKDKLKNYEKRSISSISQSQTYQKIVEHKKKFQNLKKHSIKLKYL 416

Query: 366 EWEFEYDK 389
           E +FE DK
Sbjct: 417 EGKFEQDK 424


>UniRef50_A0DYU8 Cluster: Chromosome undetermined scaffold_7, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_7, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1346

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +3

Query: 279  EQSKHCEKKEMHQKRIQTLRKELEYIKSTEWEFEYDKGFAQ 401
            E+ K  EK ++HQ+ I+   + LE +++ E EF+ ++ F Q
Sbjct: 948  EELKKKEKDKLHQENIKKAEQRLEKLRTEEIEFQKEQNFLQ 988


>UniRef50_UPI00006CC82C Cluster: Leucine Rich Repeat family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
           Repeat family protein - Tetrahymena thermophila SB210
          Length = 1565

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +1

Query: 562 DLEIINETQ--NEYDNKTEAHEFPKNTVCFQKTGVITCINTSEIVIDDSLY 708
           D  I+N+T+  NEY+ + E +  PKNT+   K  + T  NT  I + +S+Y
Sbjct: 674 DFLILNKTKDVNEYEEEEETNLIPKNTLNHNKRSLST--NTQYIDVKNSVY 722


>UniRef50_A1ZLR3 Cluster: Two-component hybrid sensor and regulator,
           putative; n=1; Microscilla marina ATCC 23134|Rep:
           Two-component hybrid sensor and regulator, putative -
           Microscilla marina ATCC 23134
          Length = 799

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +3

Query: 210 VTTQNRIPNFDQSLNH--VHLGHSIEQSKHCEKKEMHQKRIQTLRKELEYIKSTEWEFE 380
           V TQN +   +Q +      L  ++E  K   K+E  +KR +TLRK LE +K  + E +
Sbjct: 516 VATQNEVERQNQKITKQKTELEKALEDEKR--KRESVEKREETLRKNLEELKQAQREMD 572


>UniRef50_A0DNZ9 Cluster: Chromosome undetermined scaffold_58, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_58,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 81

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 279 EQSKHCEKKEMHQKRIQTLRKELEYIKSTEWEFE 380
           +Q+K   +K+  QK  + LR +L+YI+ T W FE
Sbjct: 38  QQAKSFSEKDQLQKMQKDLRDKLKYIEETNWMFE 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,667,194
Number of Sequences: 1657284
Number of extensions: 11072298
Number of successful extensions: 28735
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28721
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)