Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n07
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-662|AAF47775.1| 1274|Drosophila melanogaster CG11513-PA...    41   0.002
BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p pro...    31   2.2  
AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-P...    31   2.2  
AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-P...    31   2.2  
AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-P...    31   2.2  
AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-P...    31   2.2  

>AE014296-662|AAF47775.1| 1274|Drosophila melanogaster CG11513-PA,
           isoform A protein.
          Length = 1274

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = +3

Query: 279 EQSKHCEKKEMHQKRIQTLRKELEYIKSTEWEFE 380
           E  K  E  E H KR+Q LRKEL Y+  T+W +E
Sbjct: 51  EGGKAAETTENHLKRLQNLRKELSYLSETDWMYE 84


>BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p protein.
          Length = 1001

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 207  QVTTQNRIPNFDQSLNHVHL--GHSIEQSKHCEKKEMHQKRIQTLR 338
            Q++  N   N+ Q  +H H    HS  Q  H +++  HQ+R Q LR
Sbjct: 869  QLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHHQQQHHHQQRPQHLR 914


>AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-PE,
            isoform E protein.
          Length = 1001

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 207  QVTTQNRIPNFDQSLNHVHL--GHSIEQSKHCEKKEMHQKRIQTLR 338
            Q++  N   N+ Q  +H H    HS  Q  H +++  HQ+R Q LR
Sbjct: 869  QLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHHQQQHHHQQRPQHLR 914


>AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-PC,
            isoform C protein.
          Length = 1029

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 207  QVTTQNRIPNFDQSLNHVHL--GHSIEQSKHCEKKEMHQKRIQTLR 338
            Q++  N   N+ Q  +H H    HS  Q  H +++  HQ+R Q LR
Sbjct: 897  QLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHHQQQHHHQQRPQHLR 942


>AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-PB,
            isoform B protein.
          Length = 1029

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 207  QVTTQNRIPNFDQSLNHVHL--GHSIEQSKHCEKKEMHQKRIQTLR 338
            Q++  N   N+ Q  +H H    HS  Q  H +++  HQ+R Q LR
Sbjct: 897  QLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHHQQQHHHQQRPQHLR 942


>AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-PA,
            isoform A protein.
          Length = 1029

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 207  QVTTQNRIPNFDQSLNHVHL--GHSIEQSKHCEKKEMHQKRIQTLR 338
            Q++  N   N+ Q  +H H    HS  Q  H +++  HQ+R Q LR
Sbjct: 897  QLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHHQQQHHHQQRPQHLR 942


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,799,979
Number of Sequences: 53049
Number of extensions: 507088
Number of successful extensions: 1115
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)