Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n04
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   1.3  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.1  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   7.1  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   7.1  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 299 CQYKRQCLIEKLGTALQQIIL 361
           C Y+  C+++ LG  L+++IL
Sbjct: 488 CSYRPLCMLDALGKVLERLIL 508


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 354 ICCKAVPSFSIKHCLLY*HTACTCVHV*GAHRGVERTQRALRSI*Q-HS 211
           ICC      SI HC LY       V    +    ERT  A+R++ Q HS
Sbjct: 211 ICC------SIGHCTLYTRMTIEMVEQLESMASAERTASAIRNVGQMHS 253


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 301 THCVHLCSRLRCTSRSGAYSTSAKIHLTTF 212
           T C++ C       R+G Y+T + IHL+ F
Sbjct: 187 TRCLYHC----IDHRTGLYTTESGIHLSRF 212


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 301 THCVHLCSRLRCTSRSGAYSTSAKIHLTTF 212
           T C++ C       R+G Y+T + IHL+ F
Sbjct: 187 TRCLYHC----IDHRTGLYTTESGIHLSRF 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,433
Number of Sequences: 2352
Number of extensions: 14401
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)