Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2n01
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   5.0  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   8.7  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    23   8.7  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    23   8.7  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 152 IDAQKNEEPIE-NLKNKTTLVTGKKINVKLKTS 247
           ID +     +E +L+N+ T + G K+ V +KTS
Sbjct: 356 IDEETEAADVERDLRNQITGLEGYKVEVTMKTS 388


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 104 TTTAVNHCQIGYYTSQIDAQKNEE 175
           T TA +HC   YY  +  +Q  EE
Sbjct: 18  TVTAGSHCHNDYYQLKSVSQAQEE 41


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 104 TTTAVNHCQIGYYTSQIDAQKNEE 175
           T TA +HC   YY  +  +Q  EE
Sbjct: 18  TVTAGSHCHNDYYQLKSVSQAQEE 41


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 98  KNTTTAVNHCQIGYYTSQIDA 160
           K+TTT +    + YYTSQIDA
Sbjct: 42  KSTTTNLVEF-VTYYTSQIDA 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,405
Number of Sequences: 2352
Number of extensions: 14269
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)