Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m19
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.7  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    24   4.9  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    24   4.9  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.9  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   6.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.6  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 268 LGSLIARSDMIQPPLNLDGVRCI 200
           +G +I  S  I PPL +  +RC+
Sbjct: 561 IGEMILTSTQIMPPLGVSVLRCV 583



 Score = 23.4 bits (48), Expect = 6.5
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 174  PLVRRGVAYMHLTPSKLRGGWIMSDLAISDPRSMVGRTLA 293
            P++R+    +H TPS  +    +S   I    S+VGR LA
Sbjct: 1783 PILRKD-RLIHSTPSSPQETHKLSAEVIGSAESLVGRVLA 1821


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +1

Query: 268 GPWLAGRWLLYIRTKTSYRLYTMTSRQQLSTNPIYYNLSPICIQKA 405
           G    G   + +  KTS RL T T+  QLS   +  NL    + KA
Sbjct: 803 GTITTGSAFVLLSDKTSLRLITTTTDHQLSEVELRPNLPANFVVKA 848


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 145 NYRGNVITLTL*CAEESHICISLHLN*EGVGSCRI*LSAILGPWLAG 285
           +YRG+ IT T      SH+  SL +    +GS         GP   G
Sbjct: 87  DYRGSSITTTTTSTCHSHLLPSLAITGLSIGSSNSSFLRQFGPQFTG 133


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 145 NYRGNVITLTL*CAEESHICISLHLN*EGVGSCRI*LSAILGPWLAG 285
           +YRG+ IT T      SH+  SL +    +GS         GP   G
Sbjct: 87  DYRGSSITTTTTSTCHSHLLPSLAITGLSIGSSNSRFLRQFGPQFTG 133


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 616 GGNLGTECTSQRDVNLSPSITPFV*P 539
           G     EC +  D  L PS  PF  P
Sbjct: 773 GSTASAECVTNGDYMLQPSNAPFTPP 798


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +3

Query: 285 TLAPLYQDKNIISLVYNDQPPATEYQP----DILQSVADMY 395
           T  P Y ++   S   ++QPP   YQP     ++ SVA  Y
Sbjct: 357 TYWPHYWNRFTQSTAMHNQPPPPPYQPPQPYSLMASVAPSY 397


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 132 FYVYKLPRERNHLNPLVRR 188
           +YV KLP + + L PL  R
Sbjct: 479 YYVSKLPSDESSLGPLSER 497


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,331
Number of Sequences: 2352
Number of extensions: 13532
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)