Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m19
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075328-1|AAL68195.2|  372|Drosophila melanogaster GH10876p pro...    66   5e-11
AE014297-2430|AAF55486.1|  366|Drosophila melanogaster CG7780-PA...    66   5e-11
AY118276-1|AAM48305.1|  405|Drosophila melanogaster AT09889p pro...    28   9.9  
AE014134-2644|AAF53487.2|  405|Drosophila melanogaster CG13243-P...    28   9.9  

>AY075328-1|AAL68195.2|  372|Drosophila melanogaster GH10876p
           protein.
          Length = 372

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = +3

Query: 48  LFLFAFFINDSLCLTPQCRNEKGEPIDWFYVYKLPRERNHLNPLVR--RGVAYMHLTPSK 221
           LF++ F+ N++      C++E G  +DW+++YKLP+   H N L +   G+ Y+++T S+
Sbjct: 15  LFVWFFYQNEAKSKV-SCKDEAGNDVDWWHLYKLPKHYQH-NDLGKDTSGLKYLYVT-SQ 71

Query: 222 LRGGWIMSDLAISDPRSMVGRTLAPLYQD-KNIISLVYNDQPP 347
               W MS   ISDP S+  +TL PL  D  + +   YNDQ P
Sbjct: 72  NYDTWQMSGKFISDPLSLPAQTLNPLNDDPSHTLLAAYNDQQP 114



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +3

Query: 540 GHTKGVILGDKFTSLWLVHSVPRFPPIPD 626
           GH KGV+  D  T++W+VHSVP+FP IPD
Sbjct: 123 GHAKGVVASDGETAIWIVHSVPKFPTIPD 151


>AE014297-2430|AAF55486.1|  366|Drosophila melanogaster CG7780-PA
           protein.
          Length = 366

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = +3

Query: 48  LFLFAFFINDSLCLTPQCRNEKGEPIDWFYVYKLPRERNHLNPLVR--RGVAYMHLTPSK 221
           LF++ F+ N++      C++E G  +DW+++YKLP+   H N L +   G+ Y+++T S+
Sbjct: 9   LFVWFFYQNEAKSKV-SCKDEAGNDVDWWHLYKLPKHYQH-NDLGKDTSGLKYLYVT-SQ 65

Query: 222 LRGGWIMSDLAISDPRSMVGRTLAPLYQD-KNIISLVYNDQPP 347
               W MS   ISDP S+  +TL PL  D  + +   YNDQ P
Sbjct: 66  NYDTWQMSGKFISDPLSLPAQTLNPLNDDPSHTLLAAYNDQQP 108



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +3

Query: 540 GHTKGVILGDKFTSLWLVHSVPRFPPIPD 626
           GH KGV+  D  T++W+VHSVP+FP IPD
Sbjct: 117 GHAKGVVASDGETAIWIVHSVPKFPTIPD 145


>AY118276-1|AAM48305.1|  405|Drosophila melanogaster AT09889p
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = +2

Query: 356 VPTRYITICRRYVFKKQKRSNEAIKLKKV*KVQARRQILR*LRSCRNVQDAFE---IYED 526
           +PT+   I +  +F  + R N   KL +  K+   R++ +  R C NV+++F+   I+  
Sbjct: 82  MPTKQAIIFKEQLFISKLR-NTNCKLNENLKIFFERELEQIGRFCLNVEESFDGYVIFSS 140

Query: 527 ARRKRSYKRSDTGGQV 574
           ++ K+    ++ G Q+
Sbjct: 141 SKMKKGKGMTECGHQL 156


>AE014134-2644|AAF53487.2|  405|Drosophila melanogaster CG13243-PA
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = +2

Query: 356 VPTRYITICRRYVFKKQKRSNEAIKLKKV*KVQARRQILR*LRSCRNVQDAFE---IYED 526
           +PT+   I +  +F  + R N   KL +  K+   R++ +  R C NV+++F+   I+  
Sbjct: 82  MPTKQAIIFKEQLFISKLR-NTNCKLNENLKIFFERELEQIGRFCLNVEESFDGYVIFSS 140

Query: 527 ARRKRSYKRSDTGGQV 574
           ++ K+    ++ G Q+
Sbjct: 141 SKMKKGKGMTECGHQL 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,874,333
Number of Sequences: 53049
Number of extensions: 597013
Number of successful extensions: 1436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)