Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m16
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DXZ6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_Q8TUM2 Cluster: Predicted protein; n=1; Methanosarcina ...    34   2.6  
UniRef50_Q587F9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q177R5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q5DHF5 Cluster: SJCHGC09485 protein; n=1; Schistosoma j...    33   6.0  
UniRef50_Q4RED1 Cluster: Chromosome 10 SCAF15123, whole genome s...    33   7.9  
UniRef50_A5JZC7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_A2DXZ6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 336

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 113 NKKSYPSSFRSQTNGSIASEPV*DSIAKETEADLRYEGLLGDHTAGAHID 262
           N  S+ S ++  T   I S  +  S+AK+ E +  YE LL DHT  + I+
Sbjct: 158 NSDSFTSPYKMTTKSPIKSN-ISISLAKDEEEEENYEALLSDHTKDSQIN 206


>UniRef50_Q8TUM2 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 74

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +3

Query: 447 DKMKMAEKRSLARAQTCNQS*FFFQLIFDVCLCFLLYFFSCNPYCVIGYFRSFIEC 614
           +K K  EKR +    + + S  F+   F + + +LL+F SC+ + V+ +F  FI C
Sbjct: 15  NKEKKTEKRKIVINYSFSFSFSFYPPCFTIFVLYLLFFISCSSFPVL-HFLFFISC 69


>UniRef50_Q587F9 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 181

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 534 VCLCFLLYFFSCNPYCVIGYFRSFIECFFYKDKLQKCF 647
           VC+C ++     + +CV+ +F SF  CFF++  L   F
Sbjct: 74  VCVCVIIAVSFNSFFCVLSFFLSFFFCFFFQFSLSPFF 111


>UniRef50_Q177R5 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 129

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 360 TMDLRNPSVHKVMLVNQRYEPWPEMQDVL 446
           TMD+ NP   K+ + NQ Y+P PE+ + L
Sbjct: 89  TMDVMNPKKLKMRVFNQEYKPMPELNEAL 117


>UniRef50_Q5DHF5 Cluster: SJCHGC09485 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09485 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 118

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 510 FFFQLIFDVCLCFLLYFFSCNPYCVIGYFRSFIECF-FYKDKLQKCF 647
           F+F  I+ V L   LYF     +C + +F +F+ C+ F  DK + C+
Sbjct: 73  FYFVFIYFVKLIVFLYFSFATSFCFL-FFFTFLLCYKFIDDKCRYCY 118


>UniRef50_Q4RED1 Cluster: Chromosome 10 SCAF15123, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 10 SCAF15123, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 2284

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 341 SRQYIQNYGPSESFRPQGHARQPALRALAGNAGRSGQDENG 463
           S  +++N+G   +  P  HARQP +    G AG +G+ E+G
Sbjct: 784 STAFLKNHGLRPADLPPSHARQPLVDDGPGAAGAAGRPESG 824


>UniRef50_A5JZC7 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3304

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 499  INPSFFFNSFLMCVYVFFCTSFLVIHIV**VTLDRLLNVFFIKTNYRSASF 651
            IN S FF+ F  CVY  F      ++++    + R L +F IK+  ++ S+
Sbjct: 2528 INSSLFFSEFDSCVYYLFSYKSFCLYVMNSKKVQRNLGIFNIKSVVKNISY 2578


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,092,595
Number of Sequences: 1657284
Number of extensions: 13830617
Number of successful extensions: 35338
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35324
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)