Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m15
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0I5Q1 Cluster: Haemophilus-specific protein, uncharact...    33   4.0  
UniRef50_Q20AJ9 Cluster: HDCME31P-like protein; n=1; Ictalurus p...    33   6.9  
UniRef50_Q8PTG9 Cluster: Conserved protein; n=6; cellular organi...    32   9.2  

>UniRef50_Q0I5Q1 Cluster: Haemophilus-specific protein,
           uncharacterized; n=1; Haemophilus somnus 129PT|Rep:
           Haemophilus-specific protein, uncharacterized -
           Haemophilus somnus (strain 129Pt) (Histophilus somni
           (strain 129Pt))
          Length = 110

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 23/66 (34%), Positives = 33/66 (50%)
 Frame = -2

Query: 388 FTLFFLIKHLEALC*VFEI*TCFLFWILFMYLPASCKANIRTSGSLR*SLLPQSKPRCYR 209
           F LF++I HL AL  +F    C   W+ F YLP   +  IR       +LLP +  +   
Sbjct: 42  FGLFYVIYHLFAL--IF----CLALWVAFQYLPKEAQQFIR-------NLLPTNNEKETS 88

Query: 208 TGFRSG 191
            G+R+G
Sbjct: 89  DGYRNG 94


>UniRef50_Q20AJ9 Cluster: HDCME31P-like protein; n=1; Ictalurus
           punctatus|Rep: HDCME31P-like protein - Ictalurus
           punctatus (Channel catfish)
          Length = 146

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 205 GFRSGTTPLACKATVAANISSTVFYVSPLCYF 110
           G   GT P   K+T+A NI S +  +S +CYF
Sbjct: 58  GAHKGTCPPIIKSTIALNIISALLAMSGICYF 89


>UniRef50_Q8PTG9 Cluster: Conserved protein; n=6; cellular
           organisms|Rep: Conserved protein - Methanosarcina mazei
           (Methanosarcina frisia)
          Length = 417

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 555 LFSLSSTLYFRYKALRPRRATNNNTDHTN 469
           L +L+ TLY RY+ L  R   NNN +++N
Sbjct: 341 LLTLNITLYDRYRVLHARNTNNNNNNNSN 369


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,773,359
Number of Sequences: 1657284
Number of extensions: 11718714
Number of successful extensions: 25054
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25052
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)