Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m14
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +3

Query: 153 ALVSGNV----TPNRPRLLKRPLTPTKHQPSPNVTPKS 254
           AL+S N+    +P R +  +   +P+  Q SP+VT  S
Sbjct: 673 ALMSNNILPPESPTRDKSKQNEKSPSPQQRSPSVTDLS 710


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +3

Query: 318 KKSPKR---IFENPDLELTENSDTTTPSPKAE 404
           K S KR   + E+PD   ++ S T +P P+ E
Sbjct: 205 KSSAKRKQLVSEHPDSPNSKKSATPSPPPQLE 236


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 149 NASYNVIHCAPFLKISTIRTFIGI 78
           N  + V H  P+L    I +F+G+
Sbjct: 40  NGRFTVDHIDPYLCTHIIYSFVGL 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,772
Number of Sequences: 336
Number of extensions: 2849
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)