Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m14
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           26   0.74 
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   3.9  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    23   9.1  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 26.2 bits (55), Expect = 0.74
 Identities = 24/90 (26%), Positives = 38/90 (42%)
 Frame = +3

Query: 153 ALVSGNVTPNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPK 332
           A+ SG + P  P     P T T    +  V P +      +  ++PT     A  + +  
Sbjct: 16  AVTSGQIDP--PTTTVAPATTTVAPTTTTVAPTT------TTTVAPTTTTTVAPGQTTTT 67

Query: 333 RIFENPDLELTENSDTTTPSPKAEKVKKHL 422
            +   P +  T ++DTTTPS   + VK  L
Sbjct: 68  TVASGP-VTTTGSTDTTTPSSAPQDVKAAL 96


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
 Frame = +3

Query: 153 ALVSGNVTPNRPRLLKRPLT--PTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKS 326
           A+ SG + P    +     T  PT    +P  T         ++    T     A  + +
Sbjct: 16  AVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTT 75

Query: 327 PKRIFENPDLELTENSDTTTPSPKAEKVKKHL 422
              +   P +  T ++DTTTPS   + VK  L
Sbjct: 76  TTTVASGP-VTTTGSTDTTTPSSAPQDVKAAL 106


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 278 YRAIFDEFTFGSDIWGGL 225
           +R ++++   GSD W GL
Sbjct: 19  FRDVYEKVELGSDSWQGL 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,728
Number of Sequences: 2352
Number of extensions: 11103
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)