Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2m14
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical ... 32 0.33
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 31 0.57
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 31 0.57
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 31 0.57
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 31 0.57
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 31 0.57
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 31 0.57
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 31 0.57
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 31 0.57
AF099920-5|AAK29843.2| 361|Caenorhabditis elegans Serpentine re... 30 1.0
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 1.7
Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical pr... 29 2.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.3
U20861-1|AAA62293.1| 302|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 3.1
Z81457-6|CAE17710.1| 186|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase prot... 28 4.0
AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase prot... 28 4.0
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF016415-2|AAW88413.1| 296|Caenorhabditis elegans Serpentine re... 28 5.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 5.3
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 27 7.0
U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical pr... 27 7.0
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 27 7.0
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 27 7.0
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 27 7.0
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 27 7.0
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 27 7.0
AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 27 7.0
Z69360-9|CAN86601.1| 296|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z69360-8|CAA93284.1| 297|Caenorhabditis elegans Hypothetical pr... 27 9.3
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 9.3
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 9.3
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 9.3
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 9.3
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 27 9.3
>AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical
protein W06H3.1 protein.
Length = 654
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +3
Query: 165 GNVTPNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFE 344
G P PRL + L P ++ P V PK E + + K+ PK+I +
Sbjct: 71 GEEEPPAPRL--KDLRPLQYSADPKVPPKP--FEPKPVKKELIGVKENLKETTEPKKIEK 126
Query: 345 NPDLELTENSDTTTPSPKAEKVKKHLKNEL 434
P+ P + EK+ + LKN L
Sbjct: 127 KPENPYIGAKTPLNPQERNEKLTESLKNHL 156
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 338 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 396
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 397 NNSAPSDS 404
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 201 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 259
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 260 NNSAPSDS 267
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 338 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 396
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 397 NNSAPSDS 404
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 313 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 371
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 372 NNSAPSDS 379
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 304 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 362
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 363 NNSAPSDS 370
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 279 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 337
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 338 NNSAPSDS 345
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 364 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 422
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 423 NNSAPSDS 430
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 31.1 bits (67), Expect = 0.57
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 177 PNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDL 356
P P++++RP+ + PN TP FV S FLS AM SP N +
Sbjct: 339 PPIPKVIERPIKQEIDESPPNHTPTGSFVSS-SGFLSEVTNNTAAMQITSPNDSRPNNFM 397
Query: 357 ELTENSDT 380
+ SD+
Sbjct: 398 NNSAPSDS 405
>AF099920-5|AAK29843.2| 361|Caenorhabditis elegans Serpentine
receptor, class w protein94 protein.
Length = 361
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 70 FHVIPINVRIVDIFRKGAQWITL*EALLLW 159
FH+ IN+ I D FR+ + W+++ AL+ W
Sbjct: 114 FHMYWINIVINDFFRRCSTWLSVAMALIRW 143
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 228 PSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDLELTENSDTTTPSPKAEK 407
P+P P+S S P + A VK+ R + +TE+S+ +T S A++
Sbjct: 542 PAPRGRPRSRSAAKVSENTEPLSEAPSAPVKRGRGRPRSRSTMSITEDSEPSTSSTAAKR 601
Query: 408 VKKHLKNE 431
K+ +E
Sbjct: 602 SKRAESDE 609
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +3
Query: 162 SGNVTPNRPRLLKRPLTPTKHQPSPNVTP-KSEFVEDRSIFLSPTLQKKKAM-VKKSPKR 335
SG V P+ P L K P P + P K + E + L+ L P +
Sbjct: 742 SGTV-PSAPELTKNPAPPVPEASEASAEPPKIDIPEQATPILALALALPTVSPTALEPPK 800
Query: 336 IFENPDLELTENSDTTTPSPKA 401
ENP EL S+ + +P+A
Sbjct: 801 AQENPTAELPTTSEISGRAPQA 822
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 174 TPNRPRLLKR----PLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIF 341
TP P +K P TPT + +P TP + +S +PT K +P +
Sbjct: 363 TPTTPTTMKSTPTTPTTPTTMKSTPT-TPTTPTTM-KSTPTTPTTMKSTPTTPTTPTTMK 420
Query: 342 ENPDLELTENSDTTTPS 392
P T S TTPS
Sbjct: 421 STPTTPTTMKSTPTTPS 437
Score = 27.1 bits (57), Expect = 9.3
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Frame = +3
Query: 174 TPNRPRLLKR----PLTPTKHQPSPNV-TPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRI 338
TP P +K P TPT + +P T + + +PT K +P +
Sbjct: 223 TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 282
Query: 339 FENPDLELTENSDTTTPS 392
P T S TTP+
Sbjct: 283 KSTPTTPTTMKSTPTTPT 300
>Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical
protein F01D4.5a protein.
Length = 223
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 342 ENPDLELTENSDTTTPSPKAEKVKKHLKNELD 437
E DLE T NS +P K +VKK +NE D
Sbjct: 2 EIDDLESTSNSVHKSPPKKRRRVKKKKRNEED 33
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 198 KRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKA---MVKKSPKRIFENPDLELTE 368
++P +PTK + +P + E SP+ KK +KSP++ E P +
Sbjct: 1803 EKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPK 1862
Query: 369 NSDTTTPSPKAEK 407
S +P K K
Sbjct: 1863 KSPPGSPKKKKSK 1875
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 198 KRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKA---MVKKSPKRIFENPDLELTE 368
++P +PTK + +P + E SP+ KK +KSP++ E P +
Sbjct: 1803 EKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPK 1862
Query: 369 NSDTTTPSPKAEK 407
S +P K K
Sbjct: 1863 KSPPGSPKKKKSK 1875
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 198 KRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKA---MVKKSPKRIFENPDLELTE 368
++P +PTK + +P + E SP+ KK +KSP++ E P +
Sbjct: 1803 EKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPK 1862
Query: 369 NSDTTTPSPKAEK 407
S +P K K
Sbjct: 1863 KSPPGSPKKKKSK 1875
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 198 KRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKA---MVKKSPKRIFENPDLELTE 368
++P +PTK + +P + E SP+ KK +KSP++ E P +
Sbjct: 1803 EKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPK 1862
Query: 369 NSDTTTPSPKAEK 407
S +P K K
Sbjct: 1863 KSPPGSPKKKKSK 1875
>U20861-1|AAA62293.1| 302|Caenorhabditis elegans Hypothetical
protein C28H8.5a protein.
Length = 302
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 177 VLRCLKPKQQRFLQCNPLCSFSKNIHYTYIYWYHMETHMGIYNVF 43
+ R KP L P C FS N+ +++ + H + H+ + N F
Sbjct: 9 IKRFHKPSCSSILPKYPGCPFSLNLSLSFLNFTHYDVHLQMINRF 53
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 150 AALVSGNVTPNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSP 329
A+++ G V N P+L +P + +P P PK + D P K K K +P
Sbjct: 143 ASILKGGVLKNEPKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKP---KPKPKPKPNP 199
Query: 330 K 332
K
Sbjct: 200 K 200
>Z81457-6|CAE17710.1| 186|Caenorhabditis elegans Hypothetical
protein C01G12.9 protein.
Length = 186
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +3
Query: 234 PNVTPKSEFVEDRSIFLS------PTLQKKKAMVKKSPKRIFENPDLELTENSDTTTPSP 395
PN+ K + V+ R+ L+ LQK+K + K + ++PD L S S
Sbjct: 94 PNIAVKKQIVKKRAQELARQRQFEEALQKRKDLEKNDSRSFLQSPDDTLKNVSSIQFESQ 153
Query: 396 KAEKVKKHLKNE 431
+ +K LKN+
Sbjct: 154 MSVIQRKKLKNK 165
>AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase protein.
Length = 1262
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = +3
Query: 180 NRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTL---QKKKAMVKKSPKRIFENP 350
N P+ K + + TPK EFV +S+ ++P + K + P R+ + P
Sbjct: 1151 NLPQTPKTSARTSMRMETVPKTPKQEFVTSKSVPMTPIFSNNENKSPSRARMPSRVLKTP 1210
Query: 351 -DLELTENSDTTTPSPKAEKVKKHL 422
++ + D P + K L
Sbjct: 1211 RQVKTFQEEDDEAPKRSTTRQLKPL 1235
>AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase protein 1
protein.
Length = 1262
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = +3
Query: 180 NRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTL---QKKKAMVKKSPKRIFENP 350
N P+ K + + TPK EFV +S+ ++P + K + P R+ + P
Sbjct: 1151 NLPQTPKTSARTSMRMETVPKTPKQEFVTSKSVPMTPIFSNNENKSPSRARMPSRVLKTP 1210
Query: 351 -DLELTENSDTTTPSPKAEKVKKHL 422
++ + D P + K L
Sbjct: 1211 RQVKTFQEEDDEAPKRSTTRQLKPL 1235
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +3
Query: 177 PNRPRLLKRP-LTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPD 353
P +P LK+P +P + T + D P K A KK E+PD
Sbjct: 136 PPKPAALKKPPWEDDPDEPEADFTMPAPKKPDTEDLADPPEPPKPAAPKKWKPPWEEDPD 195
Query: 354 LELTENSDTTTPSPK 398
+D T P+PK
Sbjct: 196 EPEEPEADYTMPAPK 210
Score = 27.5 bits (58), Expect = 7.0
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = +3
Query: 165 GNVTPNRPRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFE 344
G P P+L K+ P K P PKS+ V + P K A KK E
Sbjct: 222 GGPKPKDPKLAKK--APAK---KPTDKPKSKDVPKEAP--KPAEPPKPAAPKKWKPPWEE 274
Query: 345 NPDLELTENSDTTTPSPK 398
+PD +D T P+PK
Sbjct: 275 DPDEPEEPEADFTMPAPK 292
>AF016415-2|AAW88413.1| 296|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 29 protein.
Length = 296
Score = 27.9 bits (59), Expect = 5.3
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 39 IKKHCKFPCAFPCDTNKCTYSGYF-*KRSTMDYIVGSVAALVSGNV-TPNRPRLLKRPLT 212
I ++CK F C NKC +S YF +RST+ I V+ L+ N+ NR L K P+
Sbjct: 155 IPENCK---NFGCAVNKC-FSNYFRIQRSTVFSINVFVSILLFVNLFLRNRKYLKKHPIN 210
Query: 213 --PTK 221
PTK
Sbjct: 211 NKPTK 215
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 162 SGNVTPNRPRLLKRPLTPTKHQPSPNVTPKSEFV 263
+G TPNR ++ K P + P V PK+ V
Sbjct: 1075 TGGTTPNRRKMSKSPSPAPRGSAPPPVAPKTRVV 1108
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +3
Query: 186 PRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKR----IFENPD 353
PR + L QP +PK + + S +P+ K + +K P+R NP
Sbjct: 219 PRGHGKQLRMAVQQPLSTSSPKKKTINANSATAAPSFMKLSKVGQKIPERRGGSRVSNPT 278
Query: 354 LELTENSDTTTPSPKAEKVKK 416
L + NS + K K KK
Sbjct: 279 LS-SSNSSSPANDEKENKSKK 298
>U29535-3|AAK31458.1| 556|Caenorhabditis elegans Hypothetical
protein C25H3.6a protein.
Length = 556
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 75 CDTNKCTYSGYF*KRSTMDYIVGSVAALVSGNVTPNRP 188
CD K SG + +T + + SVA L+ +TPN P
Sbjct: 83 CDEVKRPQSGASSRNTTPNVLSPSVARLMQRGITPNTP 120
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 303 KKAMVKKSPKRIFENPDLELTENSDTTTPSPKAEKVKKHLKNELD 437
KKA+VKK+ + E EN K +K KK+L+ +D
Sbjct: 393 KKALVKKNKMKDRRKQKWENRENKTEGEKQTKQDKRKKNLQKRID 437
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 303 KKAMVKKSPKRIFENPDLELTENSDTTTPSPKAEKVKKHLKNELD 437
KKA+VKK+ + E EN K +K KK+L+ +D
Sbjct: 411 KKALVKKNKMKDRRKQKWENRENKTEGEKQTKQDKRKKNLQKRID 455
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +3
Query: 207 LTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDLELTENSDTTT 386
+TP P NV + + T+QKK+ K K++FE E E T
Sbjct: 362 ITPAPWGPIDNVAETGPLIYMDVVTAPKTVQKKQ----KPRKQVFEKDPYEYYEPPPTKR 417
Query: 387 PSPKAEKVKKHLK 425
P+P + KK K
Sbjct: 418 PAP-PPRFKKTFK 429
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +3
Query: 207 LTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDLELTENSDTTT 386
+TP P NV + + T+QKK+ K K++FE E E T
Sbjct: 1133 ITPAPWGPIDNVAETGPLIYMDVVTAPKTVQKKQ----KPRKQVFEKDPYEYYEPPPTKR 1188
Query: 387 PSPKAEKVKKHLK 425
P+P + KK K
Sbjct: 1189 PAP-PPRFKKTFK 1200
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +3
Query: 207 LTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDLELTENSDTTT 386
+TP P NV + + T+QKK+ K K++FE E E T
Sbjct: 1130 ITPAPWGPIDNVAETGPLIYMDVVTAPKTVQKKQ----KPRKQVFEKDPYEYYEPPPTKR 1185
Query: 387 PSPKAEKVKKHLK 425
P+P + KK K
Sbjct: 1186 PAP-PPRFKKTFK 1197
>AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical
protein K06A5.1 protein.
Length = 629
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +3
Query: 198 KRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDLELTENSD 377
KR P K Q TP+ + D I S +++ + K S R + P ++ EN
Sbjct: 90 KRLADPNKLQDPSEKTPRKTKLRDGKIIDSNDQKQEVSSRKWSVGRSKKRPPTQMAENET 149
Query: 378 TTTPSPKAEKVK 413
++ P+ + +
Sbjct: 150 SSCMKPREKSTR 161
>Z69360-9|CAN86601.1| 296|Caenorhabditis elegans Hypothetical
protein F25H8.1b protein.
Length = 296
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 297 QKKKAMVKKSPKRIFENPDLELTENSDTTTPSPK 398
Q K+ +V++ P+ + E L+ TE++DT T SPK
Sbjct: 262 QLKEEVVEEKPESLEEIGKLD-TESTDTATGSPK 294
>Z69360-8|CAA93284.1| 297|Caenorhabditis elegans Hypothetical
protein F25H8.1a protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 297 QKKKAMVKKSPKRIFENPDLELTENSDTTTPSPK 398
Q K+ +V++ P+ + E L+ TE++DT T SPK
Sbjct: 263 QLKEEVVEEKPESLEEIGKLD-TESTDTATGSPK 295
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 204 PLTPTKHQPSPNVTPKSEFVEDRSIFLSPT 293
PL+P P PN+ P S + R+ L PT
Sbjct: 255 PLSPMPQGPPPNIPPSSIYSMPRANDLPPT 284
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 204 PLTPTKHQPSPNVTPKSEFVEDRSIFLSPT 293
PL+P P PN+ P S + R+ L PT
Sbjct: 255 PLSPMPQGPPPNIPPSSIYSMPRANDLPPT 284
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.1 bits (57), Expect = 9.3
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +3
Query: 219 KHQPSPNVTPKSEFVEDRSIFLS-----PTLQKKKA--MVKKSPKRIFENPDLELTENSD 377
K+ SP TPK V++ S S ++KKK+ + K+ K + + E+ E+
Sbjct: 348 KNSKSPKKTPKKTAVKEESEESSGDEEEEVVKKKKSSKINKRKAKESSSDEEEEVEESPK 407
Query: 378 TTTPSPKAEKVKKHLKNE 431
T SP+ K K E
Sbjct: 408 KKTKSPRKSSKKSAAKEE 425
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 294 LQKKKAMVKKSPKRIFENPDLELTENSDTTTPSPKAEKVKKHL 422
L++ +A KK + + P E +E S+ T+P+PK ++KK L
Sbjct: 418 LRETQAAQKKEVQTKKKYPS-EKSEKSEATSPTPKNTEMKKKL 459
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 27.1 bits (57), Expect = 9.3
Identities = 20/83 (24%), Positives = 34/83 (40%)
Frame = +3
Query: 186 PRLLKRPLTPTKHQPSPNVTPKSEFVEDRSIFLSPTLQKKKAMVKKSPKRIFENPDLELT 365
P +RP T T + P +S ++D L +++ + I E DLE+
Sbjct: 159 PEPRRRPATRTPSRSEPIFLDQSFEIQDDEDL---NLGGDDVFIRQIKQEIVEE-DLEIE 214
Query: 366 ENSDTTTPSPKAEKVKKHLKNEL 434
+D T PSP + + +L
Sbjct: 215 NPADATPPSPPRRRSTMQTRRQL 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,792,634
Number of Sequences: 27780
Number of extensions: 272976
Number of successful extensions: 913
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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