Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m14
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   6.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   8.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 363 TENSDTTTPSPKAEKV 410
           T+N+  TTP P+ ++V
Sbjct: 681 TQNASATTPPPQVDEV 696


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 294 LQKKKAMVKKSPKRIFENPDLE 359
           L   + + ++SP  ++ENPD E
Sbjct: 76  LHHHQVLYQQSPYLMYENPDEE 97


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 226 WCLVGVRGRLSNLGR 182
           WC V     L NLGR
Sbjct: 398 WCAVSCLRELRNLGR 412


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -2

Query: 290 WRQKYRAIFDEFTFGSDIWG-GLV 222
           W       F +FT  SD+W  G+V
Sbjct: 804 WTAPEAIAFRKFTSASDVWSMGIV 827


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,847
Number of Sequences: 438
Number of extensions: 3398
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)