Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m11
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.84 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   3.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   3.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   3.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.8  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1

Query: 391 LYSSSERSRKASKIPPLSSL 450
           +Y+SS+R R + ++ P+SSL
Sbjct: 466 IYTSSKRQRTSPQLSPMSSL 485


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = +2

Query: 254 QSASICYTGYARHLRAAHRSERPSRDQAHDVYCPNLRPQADRRPRSCTLPQK 409
           +S  I    Y   L     + +       + Y PN+     +R RSC L QK
Sbjct: 126 ESLVIKLVDYHHQLLGHFGATKVYNSMKREYYWPNMYRTIKKRLRSCDLCQK 177


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = +3

Query: 171 LTIEE--MDGGTFTISNGGVFGSLMGTPIINPP 263
           +TIEE  + G   T  NG  F S  G P   PP
Sbjct: 6   VTIEEGKLLGKISTNINGEEFCSFQGVPYAQPP 38


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = +3

Query: 171 LTIEE--MDGGTFTISNGGVFGSLMGTPIINPP 263
           +TIEE  + G   T  NG  F S  G P   PP
Sbjct: 4   VTIEEGKLLGKISTNINGEEFCSFQGVPYAQPP 36


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = +3

Query: 171 LTIEE--MDGGTFTISNGGVFGSLMGTPIINPP 263
           +TIEE  + G   T  NG  F S  G P   PP
Sbjct: 6   VTIEEGKLLGKISTNINGEEFCSFQGVPYAQPP 38


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = +3

Query: 171 LTIEE--MDGGTFTISNGGVFGSLMGTPIINPP 263
           +TI+E  + G   T  NG  F S  G P   PP
Sbjct: 4   VTIDEGKLLGKISTNINGEEFCSFQGVPYAQPP 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,157
Number of Sequences: 336
Number of extensions: 3300
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)