Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m10
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   4.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   4.3  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 397  ELEVTDVMGGAGYNASVTPHGTICLRLRDRVK-VDMTMDGA 516
            E +   V GG G   S  P+G +C  L  RV  +  TM  A
Sbjct: 1031 EADNGSVGGGGGGGGSDEPNGMLCNSLSQRVSTITSTMAAA 1071


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 433 SQRHPLHQLPQALAKCQHDKYHHRDKTG 350
           SQ+HP  Q  Q   +  H  +HH+   G
Sbjct: 267 SQQHPSSQHQQPTHQTHHHHHHHQHGGG 294


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 433 SQRHPLHQLPQALAKCQHDKYHHRDKTG 350
           SQ+HP  Q  Q   +  H  +HH+   G
Sbjct: 267 SQQHPSSQHQQPTHQTHHHHHHHQHGGG 294


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 433 SQRHPLHQLPQALAKCQHDKYHHRDKTG 350
           SQ+HP  Q  Q   +  H  +HH+   G
Sbjct: 219 SQQHPSSQHQQPTHQTHHHHHHHQHGGG 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,955
Number of Sequences: 2352
Number of extensions: 17674
Number of successful extensions: 45
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)