Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2m07
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U95018-1|AAC51755.1| 193|Homo sapiens cysteine and glycine-rich... 31 5.1
U57646-1|AAC51753.1| 193|Homo sapiens cysteine and glycine-rich... 31 5.1
U46006-1|AAC27344.1| 193|Homo sapiens smooth muscle LIM protein... 31 5.1
BT019913-1|AAV38716.1| 193|Homo sapiens cysteine and glycine-ri... 31 5.1
BC000992-1|AAH00992.1| 193|Homo sapiens cysteine and glycine-ri... 31 5.1
M26679-1|AAA58663.1| 270|Homo sapiens HOX 1.3 protein. 30 8.9
CR542277-1|CAG47073.1| 270|Homo sapiens HOXA5 protein. 30 8.9
CR542256-1|CAG47052.1| 270|Homo sapiens HOXA5 protein. 30 8.9
BT009744-1|AAP88746.1| 270|Homo sapiens homeo box A5 protein. 30 8.9
BC013682-1|AAH13682.1| 270|Homo sapiens homeobox A5 protein. 30 8.9
>U95018-1|AAC51755.1| 193|Homo sapiens cysteine and glycine-rich
protein 2 protein.
Length = 193
Score = 30.7 bits (66), Expect = 5.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 397 GFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPK 534
G + W+KN +C CG +++T E G + KG + + PK
Sbjct: 134 GAGKPWHKNCFRCAKCGKSLESTTLTEKE-GEIYCKGCYAKNFGPK 178
>U57646-1|AAC51753.1| 193|Homo sapiens cysteine and glycine-rich
protein 2 protein.
Length = 193
Score = 30.7 bits (66), Expect = 5.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 397 GFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPK 534
G + W+KN +C CG +++T E G + KG + + PK
Sbjct: 134 GAGKPWHKNCFRCAKCGKSLESTTLTEKE-GEIYCKGCYAKNFGPK 178
>U46006-1|AAC27344.1| 193|Homo sapiens smooth muscle LIM protein
protein.
Length = 193
Score = 30.7 bits (66), Expect = 5.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 397 GFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPK 534
G + W+KN +C CG +++T E G + KG + + PK
Sbjct: 134 GAGKPWHKNCFRCAKCGKSLESTTLTEKE-GEIYCKGCYAKNFGPK 178
>BT019913-1|AAV38716.1| 193|Homo sapiens cysteine and glycine-rich
protein 2 protein.
Length = 193
Score = 30.7 bits (66), Expect = 5.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 397 GFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPK 534
G + W+KN +C CG +++T E G + KG + + PK
Sbjct: 134 GAGKPWHKNCFRCAKCGKSLESTTLTEKE-GEIYCKGCYAKNFGPK 178
>BC000992-1|AAH00992.1| 193|Homo sapiens cysteine and glycine-rich
protein 2 protein.
Length = 193
Score = 30.7 bits (66), Expect = 5.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 397 GFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPK 534
G + W+KN +C CG +++T E G + KG + + PK
Sbjct: 134 GAGKPWHKNCFRCAKCGKSLESTTLTEKE-GEIYCKGCYAKNFGPK 178
>M26679-1|AAA58663.1| 270|Homo sapiens HOX 1.3 protein.
Length = 270
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 364 HNYNDHELFCGGFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPKST 540
HNY DH F + + G+ G + D S R+ G FG G R YA ++
Sbjct: 22 HNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSG--SGHFGSGERARSYAASAS 78
>CR542277-1|CAG47073.1| 270|Homo sapiens HOXA5 protein.
Length = 270
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 364 HNYNDHELFCGGFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPKST 540
HNY DH F + + G+ G + D S R+ G FG G R YA ++
Sbjct: 22 HNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSG--SGHFGSGERARSYAASAS 78
>CR542256-1|CAG47052.1| 270|Homo sapiens HOXA5 protein.
Length = 270
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 364 HNYNDHELFCGGFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPKST 540
HNY DH F + + G+ G + D S R+ G FG G R YA ++
Sbjct: 22 HNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSG--SGHFGSGERARSYAASAS 78
>BT009744-1|AAP88746.1| 270|Homo sapiens homeo box A5 protein.
Length = 270
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 364 HNYNDHELFCGGFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPKST 540
HNY DH F + + G+ G + D S R+ G FG G R YA ++
Sbjct: 22 HNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSG--SGHFGSGERARSYAASAS 78
>BC013682-1|AAH13682.1| 270|Homo sapiens homeobox A5 protein.
Length = 270
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 364 HNYNDHELFCGGFSRQWNKNDGKCGVCGDPWDASTPRAHELGGRFGKGIIVRKYAPKST 540
HNY DH F + + G+ G + D S R+ G FG G R YA ++
Sbjct: 22 HNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSG--SGHFGSGERARSYAASAS 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,512,243
Number of Sequences: 237096
Number of extensions: 2473103
Number of successful extensions: 4406
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4406
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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