Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m02
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q697D7 Cluster: WbuO; n=1; Escherichia coli|Rep: WbuO -...    34   3.0  
UniRef50_A5H2Q1 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q64RQ3 Cluster: Arsenate reductase; n=2; Bacteroides fr...    34   4.0  
UniRef50_A1BEW0 Cluster: Polysaccharide biosynthesis protein; n=...    33   9.2  
UniRef50_Q6M045 Cluster: Nitroreductase family; n=8; cellular or...    33   9.2  
UniRef50_Q9KGC7 Cluster: Uncharacterized protein BH0177; n=1; Ba...    33   9.2  

>UniRef50_Q697D7 Cluster: WbuO; n=1; Escherichia coli|Rep: WbuO -
           Escherichia coli
          Length = 259

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -1

Query: 487 TSTDIIYSAVAKKLFYQIKFGIAFIWKTWLS*HHT---WAIWYFFPVFRIINGVRP*FLF 317
           TS +  Y    K L Y  +   +FI    LS   +   WAIW+  P+F + N VR  F  
Sbjct: 84  TSVEFQYYENNKFLIYSSRLVFSFILSVLLSYFVSSLVWAIWFILPIFYVYNNVRNRFNL 143

Query: 316 I 314
           I
Sbjct: 144 I 144


>UniRef50_A5H2Q1 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 540

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -3

Query: 533 FSLGILHCRPILFSLNKYRHYLLRSCKETLLPNQIWYSFHMENVAVVTSYLGNL-VFFSC 357
           FS  +L    I  +++  +H+LL  C +  +PNQ+W S+ ++ V   + ++G + ++   
Sbjct: 114 FSYDLLQSGNIKAAIS-LQHFLLDKCPKYQIPNQLW-SYLIDQVCAKSDHVGAMFIYHEL 171

Query: 356 IQDYKWRASI 327
           I ++K+ A +
Sbjct: 172 IDNHKFYAEL 181


>UniRef50_Q64RQ3 Cluster: Arsenate reductase; n=2; Bacteroides
           fragilis|Rep: Arsenate reductase - Bacteroides fragilis
          Length = 157

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
 Frame = +2

Query: 239 YQISDTDTKKWNKIAFNSSTPRNIRN----EKKLWTHAIYNPEYRKKIPNCPSMMSRQPR 406
           + I +   + W+ I   S T  +IRN    E K W H  +   +    P+   +  R  R
Sbjct: 62  HSIREYTNENWDHIIVLSGTADDIRNLFRKEVKHWYHLPFEDLFSTAAPSEAELWDRLIR 121

Query: 407 FP-------YESYTKFDLVEEFL--CNCGVDNVCTC 487
                    YE Y + DL E+ L  C+CG ++ C C
Sbjct: 122 LKEDIQRKMYELY-RDDLREQLLPRCSCGANDFCRC 156


>UniRef50_A1BEW0 Cluster: Polysaccharide biosynthesis protein; n=4;
           Chlorobium/Pelodictyon group|Rep: Polysaccharide
           biosynthesis protein - Chlorobium phaeobacteroides
           (strain DSM 266)
          Length = 586

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +3

Query: 585 IINQNHQYQKVSILILLASM---VFQLIFIEDGNGVNGLLHA 701
           IIN  H++ K  I+  +A +   VF L+F+  G GV GLL+A
Sbjct: 151 IINGMHEFAKEKIISTIAGLFEIVFILLFLALGAGVKGLLYA 192


>UniRef50_Q6M045 Cluster: Nitroreductase family; n=8; cellular
           organisms|Rep: Nitroreductase family - Methanococcus
           maripaludis
          Length = 189

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 528 PWHFTLSTNSVFIEQVQTLSTPQLQRNSSTKSNL 427
           PWHFT+  N   ++++ T+S   L  N  +  N+
Sbjct: 45  PWHFTVIQNKELLDEINTVSKKTLAENPESMKNM 78


>UniRef50_Q9KGC7 Cluster: Uncharacterized protein BH0177; n=1;
           Bacillus halodurans|Rep: Uncharacterized protein BH0177
           - Bacillus halodurans
          Length = 272

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -3

Query: 497 FSLNKYRHYLLRSCKETLLPNQIWYSFHMENVAVVTSYLGNLVFF 363
           FSL K  HYL   CK+     + WY+ ++  +A+VT+    L+ F
Sbjct: 75  FSLGKMHHYLAFRCKD----KRQWYNLNVSCIAIVTTGYSVLIAF 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,986,827
Number of Sequences: 1657284
Number of extensions: 14393702
Number of successful extensions: 36743
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36717
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)